RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Znhit6Q3UFB2 460 aaKnown RBP20.17■□□□□ 0.82
Lig3-204ENSMUST00000131537 Sp140Q6NSQ5 534 aa20.17■□□□□ 0.82
Lig3-204ENSMUST00000131537 LipfQ9CPP7 395 aa20.17■□□□□ 0.82
Lig3-204ENSMUST00000131537 Mrps17Q9CQE3 120 aaKnown RBP20.17■□□□□ 0.82
Lig3-204ENSMUST00000131537 Sertad3Q9ERC3 197 aa20.17■□□□□ 0.82
Lig3-204ENSMUST00000131537 Vps13aQ5H8C4 3166 aa20.17■□□□□ 0.82
Lig3-204ENSMUST00000131537 Cylc2B1AWN8 422 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Xbp1O35426 267 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Hsd17b1P51656 344 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Tubgcp3P58854 905 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Gpatch4Q3TFK5 415 aaKnown RBP20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Wfikkn2Q7TQN3 571 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Tarsl2Q8BLY2 790 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Tmem259Q8CIV2 574 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 HnrnplQ8R081 586 aaKnown RBP20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Olfr846Q8VET8 312 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 CoprsQ9CQ13 173 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 DtnaQ9D2N4 746 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Ndufv2Q9D6J6 248 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Tmco5aQ9D9D5 303 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Spata9Q9D9R3 252 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Rpn2Q9DBG6 631 aaKnown RBP20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Stk25Q9Z2W1 426 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Card9A2AIV8 536 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Gm14459A2BI73 179 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Nsmce4aG3XA30 381 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Gm3488M0QW81 238 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Atf2P16951 487 aaKnown RBP20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Npr1P18293 1057 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 HelqQ2VPA6 1069 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Bpifb5Q3UQ05 490 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Ccdc57Q6PHN1 1016 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Snx14Q8BHY8 964 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Mterf2Q8BKY8 385 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Bpifb6Q8BU51 449 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 CcinQ8CDE2 588 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Pnpt1Q8K1R3 783 aaKnown RBP20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Tex46Q9CPU3 165 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Atp6v1e2Q9D593 226 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Angptl3Q9R182 455 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Cyb561d2Q9WUE3 222 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 Rps6kb2Q9Z1M4 485 aa20.16■□□□□ 0.82
Lig3-204ENSMUST00000131537 6030498E09RikB1AX85 169 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Vmn2r94E9PZK8 818 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Stx7O70439 261 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 SpnP15702 395 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Klf1P46099 358 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Polr3bP59470 1133 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Snrpd1P62315 119 aaKnown RBP20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 PfplQ5RKV8 702 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 PapolaQ61183 739 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 CcncQ62447 283 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 NovQ64299 354 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Olfr366Q7TRY4 309 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Insig1Q8BGI3 259 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 NaprtQ8CC86 538 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Imp4Q8VHZ7 291 aaKnown RBP20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Ndufs1Q91VD9 727 aaKnown RBP20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Decr1Q9CQ62 335 aaKnown RBP20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Retreg3Q9CQV4 466 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Adam21Q9JI76 729 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Kifc1Q9QWT9 674 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Ly6g6dQ9Z1Q3 135 aa20.15■□□□□ 0.82
Lig3-204ENSMUST00000131537 Olfr1049A2ARZ0 308 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Siah3B2RWG3 268 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Ddx43D3Z6P9 646 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Zfp169E9Q3R6 731 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 3110082J24RikF6Z6Z2 108 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Gm7995L7N2E4 160 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Fpr-rs3O88537 343 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 PdgfrbP05622 1098 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 F3P20352 294 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Atp13a5Q3TYU2 1216 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Ankrd6Q69ZU8 712 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Ccdc25Q78PG9 208 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Zbtb42Q811H0 420 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Lgi2Q8K4Z0 550 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Nup85Q8R480 656 aaKnown RBP20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Sh3kbp1Q8R550 709 aaKnown RBP20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Zdhhc5Q8VDZ4 715 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Polr3cQ9D483 533 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 MicalclQ9D5U9 680 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Tmem174Q9DCX7 243 aa20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 Ndrg2Q9QYG0 371 aaKnown RBP20.14■□□□□ 0.81
Lig3-204ENSMUST00000131537 CatsperbA2RTF1 1109 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Foxn2E9Q7L6 429 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Kif3cO35066 796 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Grk4O70291 574 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 IghgP01863 330 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Hnrnpa1P49312 320 aaKnown RBP20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Gm10488Q4KL05 212 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Rbl2Q64700 1135 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Atl2Q6PA06 583 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Lrrc27Q80YS5 523 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Slc18a2Q8BRU6 517 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Zfp263Q8CF60 680 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Camk1Q91YS8 374 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 MlxiplQ99MZ3 864 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 1700069L16RikQ9D9H5 109 aa20.13■□□□□ 0.81
Lig3-204ENSMUST00000131537 Trpc4Q9QUQ5 974 aa20.13■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms