RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Nup50Q9JIH2 466 aaKnown RBP12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Smpd3Q9JJY3 655 aa12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Nrxn3Q6P9K9 1571 aa12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Vmn1r3A2AMT7 306 aa12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Cntnap3E9PY62 1287 aa12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 PdynO35417 248 aa12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Rfx4Q7TNK1 735 aa12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Dennd1cQ8CFK6 786 aa12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Vmn1r79Q8R285 306 aa12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Pkp2Q9CQ73 795 aaKnown RBP12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Tlr6Q9EPW9 795 aa12.61□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Clca3bE9PUL3 1044 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Gm45837F7D3W5 961 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Rgsl1H3BL40 1073 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Vmn2r4K7N784 913 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 HpcaP84075 193 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Atg16l2Q6KAU8 623 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Naaladl1Q7M758 745 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Atp2c1Q80XR2 918 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Wdr59Q8C0M0 992 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Fam20bQ8VCS3 409 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Fbxo21Q8VDH1 627 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 DarsQ922B2 501 aaKnown RBP12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Traf7Q922B6 594 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Q99LU8 229 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Pgm3Q9CYR6 542 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Traf3Q60803 567 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Cyp2r1Q6VVW9 501 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Myl12aQ6ZWQ9 172 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Slc39a14Q75N73 489 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Wasf2Q8BH43 497 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Pcdhb21Q91V48 774 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Akr1c21Q91WR5 323 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Dmap1Q9JI44 468 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Scnn1bQ9WU38 638 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Catsperg2C6KI89 1145 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Trim15G3UY57 292 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Abhd12bG3UZN6 359 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 LtfP08071 707 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Dpep1P31428 410 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Prim2P33610 505 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 SykP48025 629 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Lsm3P62311 102 aaKnown RBP12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Serpinb5P70124 375 aaKnown RBP12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 MylpfP97457 169 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Olfr1505Q7TQQ2 316 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Zdhhc15Q8BGJ0 337 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Noc4lQ8BHY2 516 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 PhykplQ8R1K4 467 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Q9CQC3 228 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Tsga13Q9DA17 273 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Cab39lQ9DB16 337 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 PgdQ9DCD0 483 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 RhojQ9ER71 214 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Slc15a2Q9ES07 729 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Mrc1Q61830 1456 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Brcc3P46737 291 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Epb41P48193 858 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Tas2r16P59529 299 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Scrn3Q3TMH2 418 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Gxylt1Q3UHH8 404 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Zfp957Q3UT76 567 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 BC030870Q3V2G4 71 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Ahcyl1Q80SW1 530 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Mtmr12Q80TA6 747 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Pcdhb10Q91VE5 797 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Mrgpra2Q91WW4 305 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 PompQ9CQT5 141 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Clcn5Q9WVD4 746 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 VarsQ9Z1Q9 1263 aaKnown RBP12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Vmn2r25W4VSP2 855 aa12.6□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Fam155bA2BDP1 471 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Stra6O70491 670 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Cxcr3O88410 367 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Mtf2Q02395 593 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Dnajb14Q149L6 379 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Mapkapk3Q3UMW7 384 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Kansl1lQ5DTI6 991 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Nr1h2Q60644 446 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Scube1Q6NZL8 1018 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Gadl1Q80WP8 550 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Aste1Q8BIR2 672 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Cybrd1Q925G2 290 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Cables1Q9ESJ1 568 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Copg1Q9QZE5 874 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Map3k14Q9WUL6 942 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Map1bP14873 2464 aaKnown RBP12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Ahnak2E9PYB0 1738 aaKnown RBP12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Gm14401A2ARV7 303 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Kifc5bE9PUA5 672 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Gm21293E9Q4G9 266 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Hspa1bP17879 642 aaKnown RBP12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Cd37Q61470 281 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Lpcat2Q8BYI6 544 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Sfrp1Q8C4U3 314 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Q8CCC3 530 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Ttc39cQ8VE09 580 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Hnrnpa0Q9CX86 305 aaKnown RBP12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Tex22Q9D9U4 189 aa12.59□□□□□ -0.39
Sdf4-201ENSMUST00000050078 Mrpl46Q9EQI8 283 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms