RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 NAPEPLDQ6IQ20 393 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 PARM1Q6UWI2 310 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 DNAAF3Q8N9W5 541 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 FGF14Q92915 247 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 EXOC2Q96KP1 924 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 EBNA1BP2Q99848 306 aaKnown RBP21.37■■□□□ 1.01
CLN8-213ENST00000637156 TRIM56Q9BRZ2 755 aaKnown RBP21.37■■□□□ 1.01
CLN8-213ENST00000637156 RPP25Q9BUL9 199 aaKnown RBP21.37■■□□□ 1.01
CLN8-213ENST00000637156 FCF1Q9Y324 198 aaKnown RBP21.37■■□□□ 1.01
CLN8-213ENST00000637156 NUP210Q8TEM1 1887 aaPredicted RBP21.37■■□□□ 1.01
CLN8-213ENST00000637156 SMAD6O43541 496 aaKnown RBP21.37■■□□□ 1.01
CLN8-213ENST00000637156 TPH1P17752 444 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 CTSOP43234 321 aaPredicted RBP21.37■■□□□ 1.01
CLN8-213ENST00000637156 SCNN1BP51168 640 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 FUT11Q495W5 492 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 KIAA0907Q7Z7F0 614 aaPredicted RBP21.37■■□□□ 1.01
CLN8-213ENST00000637156 LINC00523Q86TU6 105 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 ADIPOR2Q86V24 386 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 TBL1YQ9BQ87 522 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 SLC2A11Q9BYW1 496 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 ACBD3Q9H3P7 528 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 NOD2Q9HC29 1040 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 THG1LQ9NWX6 298 aaKnown RBP21.37■■□□□ 1.01
CLN8-213ENST00000637156 GGA2Q9UJY4 613 aa21.37■■□□□ 1.01
CLN8-213ENST00000637156 CISD3P0C7P0 127 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 ADH5P11766 374 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 PABPC1P11940 636 aaKnown RBP21.36■■□□□ 1.01
CLN8-213ENST00000637156 NSUN2Q08J23 767 aaKnown RBP eCLIP21.36■■□□□ 1.01
CLN8-213ENST00000637156 PCSK7Q16549 785 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 CEP85LQ5SZL2 805 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 CERCAMQ5T4B2 595 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 TMEM215Q68D42 235 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 C12orf40Q86WS4 652 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 RNF135Q8IUD6 432 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 E2F7Q96AV8 911 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 RPL10LQ96L21 214 aaKnown RBP21.36■■□□□ 1.01
CLN8-213ENST00000637156 SH3GL2Q99962 352 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 FICDQ9BVA6 458 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 VPS37BQ9H9H4 285 aa21.36■■□□□ 1.01
CLN8-213ENST00000637156 ZC3H7BQ9UGR2 993 aaKnown RBP21.36■■□□□ 1.01
CLN8-213ENST00000637156 HOXC11O43248 304 aaPredicted RBP21.35■■□□□ 1.01
CLN8-213ENST00000637156 ABHD2P08910 425 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 SERPINH1P50454 418 aaKnown RBP21.35■■□□□ 1.01
CLN8-213ENST00000637156 EIF3BP55884 814 aaKnown RBP21.35■■□□□ 1.01
CLN8-213ENST00000637156 CDH17Q12864 832 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 GAB4Q2WGN9 574 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 SUSD6Q92537 303 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 ECT2Q9H8V3 914 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 HPS4Q9NQG7 708 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 MAD1L1Q9Y6D9 718 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 DOCK8Q8NF50 2099 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 H3BQ06 376 aaPredicted RBP21.35■■□□□ 1.01
CLN8-213ENST00000637156 INSIG1O15503 277 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 ZNF821O75541 412 aaPredicted RBP21.35■■□□□ 1.01
CLN8-213ENST00000637156 NFATC1O95644 943 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 ADH1CP00326 375 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 SLC20A2Q08357 652 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 IFFO1Q0D2I5 559 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 ZNF557Q8N988 423 aaPredicted RBP21.35■■□□□ 1.01
CLN8-213ENST00000637156 ATP11CQ8NB49 1132 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 ATP2A3Q93084 1043 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 ELSPBP1Q96BH3 223 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 RUFY1Q96T51 708 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 GAS2L1Q99501 681 aaPredicted RBP21.35■■□□□ 1.01
CLN8-213ENST00000637156 KXD1Q9BQD3 176 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 FSD1LQ9BXM9 530 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 SYBUQ9NX95 663 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 BFARQ9NZS9 450 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 LHX3Q9UBR4 397 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 BRWD1Q9NSI6 2320 aa21.35■■□□□ 1.01
CLN8-213ENST00000637156 LOC285095A0A1B0GVY8 99 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 H3BQF6 201 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 PSMC3P17980 439 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 CHRNA4P43681 627 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 NPY2RP49146 381 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 GRM2Q14416 872 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 PDGFRLQ15198 375 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 GEN1Q17RS7 908 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 ETFBKMTQ8IXQ9 262 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.34■■□□□ 1.01
CLN8-213ENST00000637156 NUDCD1Q96RS6 583 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 ARNT2Q9HBZ2 717 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 RABGEF1Q9UJ41 708 aa21.34■■□□□ 1.01
CLN8-213ENST00000637156 USP15Q9Y4E8 981 aaPredicted RBP21.34■■□□□ 1.01
CLN8-213ENST00000637156 A0A087WUV0 522 aaPredicted RBP21.33■■□□□ 1.01
CLN8-213ENST00000637156 CPP00450 1065 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 SERPINF2P08697 491 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 TSHRP16473 764 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 CES1P23141 567 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 SLC6A11P48066 632 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 STK19P49842 368 aaPredicted RBP21.33■■□□□ 1.01
CLN8-213ENST00000637156 GEMIN4P57678 1058 aaKnown RBP21.33■■□□□ 1.01
CLN8-213ENST00000637156 DGKKQ5KSL6 1271 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 CASC4Q6P4E1 433 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 UNC5AQ6ZN44 842 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 MYLIPQ8WY64 445 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 STAMBPL1Q96FJ0 436 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 NECTIN4Q96NY8 510 aa21.33■■□□□ 1.01
CLN8-213ENST00000637156 XPO6Q96QU8 1125 aaKnown RBP21.33■■□□□ 1.01
CLN8-213ENST00000637156 TMEM109Q9BVC6 243 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms