RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 TREX1Q9NSU2 369 aa12.61□□□□□ -0.39
UBASH3A-209ENST00000635325 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.61□□□□□ -0.39
UBASH3A-209ENST00000635325 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.61□□□□□ -0.39
UBASH3A-209ENST00000635325 MCM8Q9UJA3 840 aa12.61□□□□□ -0.39
UBASH3A-209ENST00000635325 C15orf41Q9Y2V0 281 aa12.61□□□□□ -0.39
UBASH3A-209ENST00000635325 MYLKQ15746 1914 aa12.61□□□□□ -0.39
UBASH3A-209ENST00000635325 NT5C1B-RDH14C9J2C7 533 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 H0Y3Z8 333 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 DIAPH2O60879 1101 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 NEBLO76041 1014 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 CPB1P15086 417 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 SELPP16109 830 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 FGFR3P22607 806 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 GLRBP48167 497 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 SLC11A1P49279 550 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 USP4Q13107 963 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 KHDC1Q4VXA5 237 aaKnown RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 ZNF280DQ6N043 979 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 RNF19BQ6ZMZ0 732 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 ZNF781Q8N8C0 355 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 PNPLA1Q8N8W4 532 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 KCTD4Q8WVF5 259 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 PSMG2Q969U7 264 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 MCUR1Q96AQ8 359 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 ARMC5Q96C12 935 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 PABPC5Q96DU9 382 aaKnown RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 IMP4Q96G21 291 aaKnown RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 CASD1Q96PB1 797 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 TACO1Q9BSH4 297 aaKnown RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 ACE2Q9BYF1 805 aaPredicted RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 TASP1Q9H6P5 420 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 TMEM248Q9NWD8 314 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 MARCH2Q9P0N8 246 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 TAGLN3Q9UI15 199 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 PCDHB12Q9Y5F1 795 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 MTMR11A4FU01 709 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 AURKAO14965 403 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 GJB3O75712 270 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 MMP2P08253 660 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 ALOX15P16050 662 aaPredicted RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 CD86P42081 329 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 NDST2P52849 883 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 DSC2Q02487 901 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 KPNB1Q14974 876 aaKnown RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 TRIP4Q15650 581 aaPredicted RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 MGAT5BQ3V5L5 792 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 ZNF470Q6ECI4 717 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 LRRC49Q8IUZ0 686 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 CENPLQ8N0S6 344 aaPredicted RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 SPATA6LQ8N4H0 392 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 AGR3Q8TD06 166 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 WDR60Q8WVS4 1066 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 BTN2A3PQ96KV6 586 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 UNKQ9C0B0 810 aaKnown RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 SLC25A51Q9H1U9 297 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 NSMCE4AQ9NXX6 385 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 CLIC5Q9NZA1 410 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 ZNF212Q9UDV6 495 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 TLK1Q9UKI8 766 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 PCDHB7Q9Y5E2 793 aa12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.6□□□□□ -0.39
UBASH3A-209ENST00000635325 FNDC1Q4ZHG4 1894 aaPredicted RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 IGLV3-10A0A075B6K4 115 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 OR6C75A6NL08 312 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 MEI4A8MW99 385 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 SIN3BO75182 1162 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 HSPA4LO95757 839 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 ATP5BP06576 529 aaKnown RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 CHRNGP07510 517 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 TPBGLP0DKB5 382 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 GNAZP19086 355 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 PGM1P36871 562 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 HADHAP40939 763 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 CCR10P46092 362 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 RENBPP51606 427 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 ITKQ08881 620 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 TAS1R1Q7RTX1 841 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 CCDC117Q8IWD4 279 aaPredicted RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 ENDOVQ8N8Q3 282 aaKnown RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 BCL7CQ8WUZ0 217 aaPredicted RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 GATA5Q9BWX5 397 aaPredicted RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 CCSER2Q9H7U1 834 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 MRM3Q9HC36 420 aaKnown RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 OXSMQ9NWU1 459 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 DNAJC28Q9NX36 388 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 FNIP2Q9P278 1114 aa12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 RPL26L1Q9UNX3 145 aaKnown RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 APOBEC2Q9Y235 224 aaKnown RBP12.59□□□□□ -0.39
UBASH3A-209ENST00000635325 FAM95CA0A1B0GW59 222 aa12.58□□□□□ -0.39
UBASH3A-209ENST00000635325 SLC12A8A0AV02 714 aa12.58□□□□□ -0.39
UBASH3A-209ENST00000635325 TRIM13O60858 407 aa12.58□□□□□ -0.39
UBASH3A-209ENST00000635325 IGLV3-27P01718 113 aa12.58□□□□□ -0.39
UBASH3A-209ENST00000635325 RPSAP08865 295 aaKnown RBP12.58□□□□□ -0.39
UBASH3A-209ENST00000635325 AOC1P19801 751 aa12.58□□□□□ -0.39
UBASH3A-209ENST00000635325 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.39
UBASH3A-209ENST00000635325 DLG1Q12959 904 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms