RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 OR1E1P30953 314 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 SLC5A2P31639 672 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 NOS2P35228 1153 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 DNA2P51530 1060 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 THOP1P52888 689 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 SRSF1Q07955 248 aaKnown RBP eCLIP20.5■□□□□ 0.874e-8■□□□□ 11.3
TARDBP-228ENST00000629725 RETSATQ6NUM9 610 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 ESRP1Q6NXG1 681 aaKnown RBP20.5■□□□□ 0.87
TARDBP-228ENST00000629725 LRRC31Q6UY01 552 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 ATG14Q6ZNE5 492 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 C11orf57Q6ZUT1 292 aaPredicted RBP20.5■□□□□ 0.87
TARDBP-228ENST00000629725 FAM183BPQ6ZVS7 135 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 PARS2Q7L3T8 475 aaKnown RBP20.5■□□□□ 0.87
TARDBP-228ENST00000629725 TFAP2DQ7Z6R9 452 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 ZNF683Q8IZ20 524 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 WDTC1Q8N5D0 677 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 PCDH20Q8N6Y1 951 aaKnown RBP20.5■□□□□ 0.87
TARDBP-228ENST00000629725 DENND6BQ8NEG7 585 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 SPATA20Q8TB22 786 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 EXTL1Q92935 676 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 SMARCE1Q969G3 411 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 STARD5Q9NSY2 213 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 PIGVQ9NUD9 493 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 ARHGEF38Q9NXL2 777 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 PADI4Q9UM07 663 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 ZDHHC9Q9Y397 364 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 PCDHGA7Q9Y5G6 932 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 TLN1Q9Y490 2541 aaKnown RBP20.5■□□□□ 0.87
TARDBP-228ENST00000629725 AHCTF1Q8WYP5 2266 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 DRGXA6NNA5 263 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 NEMP1O14524 444 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 TSPAN6O43657 245 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 DAB1O75553 588 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 ITGB2P05107 769 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 ANXA6P08133 673 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 SERPINH1P50454 418 aaKnown RBP20.49■□□□□ 0.87
TARDBP-228ENST00000629725 CCNHP51946 323 aaPredicted RBP20.49■□□□□ 0.87
TARDBP-228ENST00000629725 EIF3IQ13347 325 aaKnown RBP20.49■□□□□ 0.87
TARDBP-228ENST00000629725 CARD16Q5EG05 197 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 BRMS1LQ5PSV4 323 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 OLFML1Q6UWY5 402 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 RAB11FIP2Q7L804 512 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 PHACTR4Q8IZ21 702 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 FMR1NBQ8N0W7 255 aaPredicted RBP20.49■□□□□ 0.87
TARDBP-228ENST00000629725 FBXO39Q8N4B4 442 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 OR7D4Q8NG98 312 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 ASB12Q8WXK4 309 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 TBATAQ96M53 351 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 SPON2Q9BUD6 331 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 LRRC61Q9BV99 259 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 SLC13A1Q9BZW2 595 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 EPB41L5Q9HCM4 733 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 ANLNQ9NQW6 1124 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 MPP6Q9NZW5 540 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 SNX10Q9Y5X0 201 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 FLNCQ14315 2725 aa20.49■□□□□ 0.87
TARDBP-228ENST00000629725 YY2O15391 372 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 NOBOXO60393 691 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 INHBCP55103 352 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 NFKB2Q00653 900 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 SLC20A2Q08357 652 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 ENOSF1Q7L5Y1 443 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 B3GNT8Q7Z7M8 397 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 JAMLQ86YT9 394 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 PASD1Q8IV76 773 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 RAB7BQ96AH8 199 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 ZDHHC6Q9H6R6 413 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 GDPD2Q9HCC8 539 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 RRN3Q9NYV6 651 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 PNMA8BQ9ULN7 279 aaPredicted RBP20.48■□□□□ 0.87
TARDBP-228ENST00000629725 ATP6V1DQ9Y5K8 247 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 SCN8AQ9UQD0 1980 aa20.48■□□□□ 0.87
TARDBP-228ENST00000629725 ILVBLA1L0T0 632 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 TMX2-CTNND1H3BSU7 103 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 I6L893 689 aaPredicted RBP20.47■□□□□ 0.87
TARDBP-228ENST00000629725 SUV39H1O43463 412 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 AFPP02771 609 aaKnown RBP20.47■□□□□ 0.87
TARDBP-228ENST00000629725 TSHRP16473 764 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 UGT1A5P35504 534 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 USP8P40818 1118 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 CXCR3P49682 368 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 SNX16P57768 344 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 SLC6A3Q01959 620 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 TGIF1Q15583 401 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 COLEC12Q5KU26 742 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 FAXCQ5TGI0 409 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 OTUD1Q5VV17 481 aaPredicted RBP20.47■□□□□ 0.87
TARDBP-228ENST00000629725 ISM2Q6H9L7 571 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 ZNF783Q6ZMS7 281 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 SLC26A9Q7LBE3 791 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 TRIM59Q8IWR1 403 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 CENPTQ96BT3 561 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 C1orf74Q96LT6 269 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 STRADBQ9C0K7 418 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 CLPBQ9H078 707 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 ATP13A1Q9HD20 1204 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 GGT7Q9UJ14 662 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 ACSL6Q9UKU0 697 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 DOLKQ9UPQ8 538 aa20.47■□□□□ 0.87
TARDBP-228ENST00000629725 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms