RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 PSMD3O43242 534 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 MMP2P08253 660 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 HSPA9P38646 679 aaKnown RBP17.79■□□□□ 0.44
SREK1-216ENST00000612404 SLMAPQ14BN4 828 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 ACCSLQ4AC99 568 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 HP1BP3Q5SSJ5 553 aaPredicted RBP17.79■□□□□ 0.44
SREK1-216ENST00000612404 KCTD11Q693B1 232 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 CYB5D2Q8WUJ1 264 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 TTC17Q96AE7 1141 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 APOL2Q9BQE5 337 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 FSD1LQ9BXM9 530 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 FRMD8Q9BZ67 464 aaPredicted RBP17.79■□□□□ 0.44
SREK1-216ENST00000612404 TM6SF2Q9BZW4 377 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 SAYSD1Q9NPB0 183 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 SCUBE2Q9NQ36 999 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 LHX3Q9UBR4 397 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 HS3ST2Q9Y278 367 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 MIA3Q5JRA6 1907 aa17.79■□□□□ 0.44
SREK1-216ENST00000612404 COL4A3Q01955 1670 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 BANF1O75531 89 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 SRCP12931 536 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 OPRD1P41143 372 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 SOX9P48436 509 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 TFF2Q03403 129 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 PDIA2Q13087 525 aaKnown RBP17.78■□□□□ 0.44
SREK1-216ENST00000612404 MPP3Q13368 585 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 BBS9Q3SYG4 887 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 ATXN7L2Q5T6C5 722 aaPredicted RBP17.78■□□□□ 0.44
SREK1-216ENST00000612404 METTL3Q86U44 580 aaKnown RBP17.78■□□□□ 0.44
SREK1-216ENST00000612404 CAND1Q86VP6 1230 aaKnown RBP17.78■□□□□ 0.44
SREK1-216ENST00000612404 NOD2Q9HC29 1040 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 XAB2Q9HCS7 855 aaKnown RBP17.78■□□□□ 0.44
SREK1-216ENST00000612404 SUN1O94901 812 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 ATP5BP06576 529 aaKnown RBP17.78■□□□□ 0.44
SREK1-216ENST00000612404 SERPINF2P08697 491 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 MSS51Q4VC12 460 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 ALG1LQ6GMV1 187 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 CEP128Q6ZU80 1094 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 ZBED8Q8IZ13 594 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 SLC44A3Q8N4M1 653 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 SH2D3CQ8N5H7 860 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 DNAAF3Q8N9W5 541 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 OR52K1Q8NGK4 314 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 NXPE3Q969Y0 559 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 TBL1YQ9BQ87 522 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 FICDQ9BVA6 458 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 TNKS2Q9H2K2 1166 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 VPS45Q9NRW7 570 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 SLCO3A1Q9UIG8 710 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 ERVW-1Q9UQF0 538 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 FAM50BQ9Y247 325 aa17.78■□□□□ 0.44
SREK1-216ENST00000612404 CXorf51AA0A1B0GTR3 108 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 TBC1D3BA6NDS4 549 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.77■□□□□ 0.44
SREK1-216ENST00000612404 PRRT4C9JH25 899 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 INSIG1O15503 277 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 PPFIA2O75334 1257 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 AGTP01019 485 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 ASGR2P07307 311 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 PMS2P54278 862 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 WNT3AP56704 352 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 SKOR1P84550 965 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 NAPEPLDQ6IQ20 393 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 ZNF534Q76KX8 674 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 ELOVL2Q9NXB9 296 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 TICRRQ7Z2Z1 1910 aa17.77■□□□□ 0.44
SREK1-216ENST00000612404 BNIP3LO60238 219 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 DLDP09622 509 aaKnown RBP17.77■□□□□ 0.43
SREK1-216ENST00000612404 CR2P20023 1033 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 NNMTP40261 264 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 SESN2P58004 480 aaPredicted RBP17.77■□□□□ 0.43
SREK1-216ENST00000612404 NSUN2Q08J23 767 aaKnown RBP eCLIP17.77■□□□□ 0.43
SREK1-216ENST00000612404 IHHQ14623 411 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 FASTKD3Q14CZ7 662 aaKnown RBP17.77■□□□□ 0.43
SREK1-216ENST00000612404 DGKKQ5KSL6 1271 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 LRRC8BQ6P9F7 803 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 KDELC1Q6UW63 502 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 LINC00523Q86TU6 105 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 KLHDC8BQ8IXV7 354 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 RYBPQ8N488 228 aaPredicted RBP17.77■□□□□ 0.43
SREK1-216ENST00000612404 TERB1Q8NA31 727 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 MAFAQ8NHW3 353 aaPredicted RBP17.77■□□□□ 0.43
SREK1-216ENST00000612404 UBLCP1Q8WVY7 318 aaPredicted RBP17.77■□□□□ 0.43
SREK1-216ENST00000612404 CHFRQ96EP1 664 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 MRGPRX2Q96LB1 330 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 NUDCD1Q96RS6 583 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 PRDM6Q9NQX0 595 aa17.77■□□□□ 0.43
SREK1-216ENST00000612404 ASLP04424 464 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 IL9P15248 144 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 CES1P23141 567 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 MAGEA4P43358 317 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 DLG2Q15700 870 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 DNAJC21Q5F1R6 531 aaKnown RBP17.76■□□□□ 0.43
SREK1-216ENST00000612404 C22orf39Q6P5X5 142 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 ANKMY2Q8IV38 441 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 SFTPA1Q8IWL2 248 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 OR6K2Q8NGY2 324 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 TXLNGYQ9BZA5 131 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 SEMA4AQ9H3S1 761 aa17.76■□□□□ 0.43
SREK1-216ENST00000612404 PLA2G4CQ9UP65 541 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms