RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 CA4P22748 312 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 SLC6A11P48066 632 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 VASPP50552 380 aaPredicted RBP15.67■□□□□ 0.1
UPF1-206ENST00000598471 ST8SIA6P61647 398 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 DSC2Q02487 901 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 NSUN2Q08J23 767 aaKnown RBP eCLIP15.67■□□□□ 0.1
UPF1-206ENST00000598471 DNAJC21Q5F1R6 531 aaKnown RBP15.67■□□□□ 0.1
UPF1-206ENST00000598471 SYCP2LQ5T4T6 812 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 FBXO38Q6PIJ6 1188 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 PGBD5Q8N414 524 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 SH2D3CQ8N5H7 860 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 TERB1Q8NA31 727 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 DNASE1L2Q92874 299 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 ISG20Q96AZ6 181 aaKnown RBP15.67■□□□□ 0.1
UPF1-206ENST00000598471 GDAP1L1Q96MZ0 367 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 NUDCD1Q96RS6 583 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 RBM15Q96T37 977 aaKnown RBP eCLIP15.67■□□□□ 0.1
UPF1-206ENST00000598471 MLPHQ9BV36 600 aaPredicted RBP15.67■□□□□ 0.1
UPF1-206ENST00000598471 LHX3Q9UBR4 397 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 ERVW-1Q9UQF0 538 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 FCF1Q9Y324 198 aaKnown RBP15.67■□□□□ 0.1
UPF1-206ENST00000598471 TRIM24O15164 1050 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 INSIG1O15503 277 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 MT-CO1P00395 513 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 APODP05090 189 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 DLDP09622 509 aaKnown RBP15.66■□□□□ 0.1
UPF1-206ENST00000598471 FAM153BP0C7A2 387 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 OPRD1P41143 372 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 CD86P42081 329 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 GRIA2P42262 883 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 CTSOP43234 321 aaPredicted RBP15.66■□□□□ 0.1
UPF1-206ENST00000598471 CSNK1DP48730 415 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 STK19P49842 368 aaPredicted RBP15.66■□□□□ 0.1
UPF1-206ENST00000598471 SCNN1BP51168 640 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 AP1S1P61966 158 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 PFKPQ01813 784 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 NIPAL4Q0D2K0 466 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 FAM153CQ494X1 144 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 TJAP1Q5JTD0 557 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 KCTD11Q693B1 232 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 C22orf39Q6P5X5 142 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 SLC44A3Q8N4M1 653 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 PCDH20Q8N6Y1 951 aaKnown RBP15.66■□□□□ 0.1
UPF1-206ENST00000598471 IPMKQ8NFU5 416 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 SPATA22Q8NHS9 363 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 ARRDC2Q8TBH0 407 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 OXNAD1Q96HP4 312 aaPredicted RBP15.66■□□□□ 0.1
UPF1-206ENST00000598471 RPL10LQ96L21 214 aaKnown RBP15.66■□□□□ 0.1
UPF1-206ENST00000598471 SERPINB12Q96P63 405 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 NECAB3Q96P71 396 aaPredicted RBP15.66■□□□□ 0.1
UPF1-206ENST00000598471 TBL1YQ9BQ87 522 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 GORASP1Q9BQQ3 440 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 C8orf33Q9H7E9 229 aaPredicted RBP15.66■□□□□ 0.1
UPF1-206ENST00000598471 ELOVL2Q9NXB9 296 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 UBP1Q9NZI7 540 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 PLA2G4CQ9UP65 541 aa15.66■□□□□ 0.1
UPF1-206ENST00000598471 MYOFQ9NZM1 2061 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 COL4A3Q01955 1670 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.65■□□□□ 0.1
UPF1-206ENST00000598471 TBC1D3BA6NDS4 549 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 MUSKO15146 869 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 PMPCBO75439 489 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 KAT7O95251 611 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 MT-CYBP00156 380 aaPredicted RBP15.65■□□□□ 0.1
UPF1-206ENST00000598471 GSRP00390 522 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 CR2P20023 1033 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 RECQLP46063 649 aaPredicted RBP15.65■□□□□ 0.1
UPF1-206ENST00000598471 WNT3AP56704 352 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 SNRPD1P62314 119 aaKnown RBP15.65■□□□□ 0.1
UPF1-206ENST00000598471 SKOR1P84550 965 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 DHX9Q08211 1270 aaKnown RBP15.65■□□□□ 0.1
UPF1-206ENST00000598471 ACCSLQ4AC99 568 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 TMEM215Q68D42 235 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 LRRC8BQ6P9F7 803 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 TMC3Q7Z5M5 1100 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 SRLQ86TD4 932 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 PRPF39Q86UA1 669 aaKnown RBP15.65■□□□□ 0.1
UPF1-206ENST00000598471 PHTF2Q8N3S3 785 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 DNAAF3Q8N9W5 541 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 KDM1BQ8NB78 822 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 IFT43Q96FT9 208 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 MSANTD3Q96H12 275 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 EXOC2Q96KP1 924 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 FICDQ9BVA6 458 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 SAYSD1Q9NPB0 183 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 XIRP2A4UGR9 3374 aa15.65■□□□□ 0.1
UPF1-206ENST00000598471 TCF20Q9UGU0 1960 aaKnown RBP15.64■□□□□ 0.09
UPF1-206ENST00000598471 K7ERQ8 282 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 SMAD6O43541 496 aaKnown RBP15.64■□□□□ 0.09
UPF1-206ENST00000598471 ATP9BO43861 1147 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 RGRP47804 291 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 RAD51Q06609 339 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 CDH17Q12864 832 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 PDIA2Q13087 525 aaKnown RBP15.64■□□□□ 0.09
UPF1-206ENST00000598471 SPARCL1Q14515 664 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 DLG2Q15700 870 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 PCSK7Q16549 785 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 BBS9Q3SYG4 887 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 BEND6Q5SZJ8 279 aaPredicted RBP15.64■□□□□ 0.09
UPF1-206ENST00000598471 KDELC1Q6UW63 502 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms