RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 C22orf39Q6P5X5 142 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 CCDC25Q86WR0 208 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 MCUQ8NE86 351 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 CYB5D2Q8WUJ1 264 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 HNRNPLLQ8WVV9 542 aaKnown RBP14.86□□□□□ -0.03
VRK3-212ENST00000596814 DNASE1L2Q92874 299 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 FRMD8Q9BZ67 464 aaPredicted RBP14.86□□□□□ -0.03
VRK3-212ENST00000596814 CEP44Q9C0F1 390 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 TSPYL1Q9H0U9 437 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 SCUBE2Q9NQ36 999 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 TRPV5Q9NQA5 729 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 PRDM6Q9NQX0 595 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 ELOVL2Q9NXB9 296 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 ERVW-1Q9UQF0 538 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 MUC22E2RYF6 1773 aaPredicted RBP14.86□□□□□ -0.03
VRK3-212ENST00000596814 TTC24A2A3L6 582 aaPredicted RBP14.86□□□□□ -0.03
VRK3-212ENST00000596814 PRRT4C9JH25 899 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 GJB3O75712 270 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 SUN1O94901 812 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 SRPRAP08240 638 aaKnown RBP14.86□□□□□ -0.03
VRK3-212ENST00000596814 MMP2P08253 660 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 DLDP09622 509 aaKnown RBP14.86□□□□□ -0.03
VRK3-212ENST00000596814 CR2P20023 1033 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 SCNN1BP51168 640 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 ARL4CP56559 192 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 SKOR1P84550 965 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 CEP128Q6ZU80 1094 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 PRPF39Q86UA1 669 aaKnown RBP14.86□□□□□ -0.03
VRK3-212ENST00000596814 RNF135Q8IUD6 432 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 IPMKQ8NFU5 416 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 SORCS1Q8WY21 1168 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 ANKRD7Q92527 254 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 CAVIN3Q969G5 261 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 PWWP2AQ96N64 755 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 SERPINB12Q96P63 405 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 NUDCD1Q96RS6 583 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 TM6SF2Q9BZW4 377 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 VPS45Q9NRW7 570 aa14.86□□□□□ -0.03
VRK3-212ENST00000596814 TBC1D3BA6NDS4 549 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 LOC730098B7Z3J9 87 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 INSIG1O15503 277 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 PPFIA2O75334 1257 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 PMPCBO75439 489 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 IGSF6O95976 241 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 APODP05090 189 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 SERPINF2P08697 491 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 CES1P23141 567 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 NNMTP40261 264 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
VRK3-212ENST00000596814 NSUN2Q08J23 767 aaKnown RBP eCLIP14.85□□□□□ -0.03
VRK3-212ENST00000596814 SPARCL1Q14515 664 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 SLC14A2Q15849 920 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 NAPEPLDQ6IQ20 393 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 KDELC1Q6UW63 502 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 CENPUQ71F23 418 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 ZNF534Q76KX8 674 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 PDIK1LQ8N165 341 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 ISG20Q96AZ6 181 aaKnown RBP14.85□□□□□ -0.03
VRK3-212ENST00000596814 TADA1Q96BN2 335 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 MRGPRX3Q96LB0 322 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 FSD1LQ9BXM9 530 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 PHACTR1Q9C0D0 580 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 NOD2Q9HC29 1040 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 XAB2Q9HCS7 855 aaKnown RBP14.85□□□□□ -0.03
VRK3-212ENST00000596814 ARFGAP3Q9NP61 516 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 ANKRD36A6QL64 1941 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 MYO10Q9HD67 2058 aa14.85□□□□□ -0.03
VRK3-212ENST00000596814 TIMM44O43615 452 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 ATP9BO43861 1147 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 KAT7O95251 611 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 CTHP32929 405 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 GRIA2P42262 883 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 TNNT3P45378 269 aaPredicted RBP14.84□□□□□ -0.03
VRK3-212ENST00000596814 WNT3AP56704 352 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 ST8SIA6P61647 398 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 DLG2Q15700 870 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 PCSK7Q16549 785 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 PTPRNQ16849 979 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 ACCSLQ4AC99 568 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 RALGPS1Q5JS13 557 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 ATXN7L2Q5T6C5 722 aaPredicted RBP14.84□□□□□ -0.03
VRK3-212ENST00000596814 NUDT18Q6ZVK8 323 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 TMC3Q7Z5M5 1100 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 LINC00523Q86TU6 105 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 SUGP1Q8IWZ8 645 aaKnown RBP14.84□□□□□ -0.03
VRK3-212ENST00000596814 PCDH20Q8N6Y1 951 aaKnown RBP14.84□□□□□ -0.03
VRK3-212ENST00000596814 UCMAQ8WVF2 138 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 MRGPRX2Q96LB1 330 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 GDAP1L1Q96MZ0 367 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 TBL1YQ9BQ87 522 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 FICDQ9BVA6 458 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 TNKS2Q9H2K2 1166 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 SLCO3A1Q9UIG8 710 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 SLC8A2Q9UPR5 921 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 UNC80Q8N2C7 3258 aa14.84□□□□□ -0.03
VRK3-212ENST00000596814 SPECC1L-ADORA2AF8WAN1 911 aa14.83□□□□□ -0.03
VRK3-212ENST00000596814 USP12O75317 370 aa14.83□□□□□ -0.03
VRK3-212ENST00000596814 ZNF821O75541 412 aaPredicted RBP14.83□□□□□ -0.03
VRK3-212ENST00000596814 GSRP00390 522 aa14.83□□□□□ -0.03
VRK3-212ENST00000596814 MLNP12872 115 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms