RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 RASA4BC9J798 803 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 PRAMEF26H0Y7S4 382 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 SLC31A1O15431 190 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 RASA4O43374 803 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 DFNA5O60443 496 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 GSRP00390 522 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 FANCCQ00597 558 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 KLHL30Q0D2K2 578 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 SUZ12Q15022 739 aaKnown RBP13.27□□□□□ -0.29
LIG1-212ENST00000596549 SLC45A4Q5BKX6 768 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 ATXN7L2Q5T6C5 722 aaPredicted RBP13.27□□□□□ -0.29
LIG1-212ENST00000596549 PPP1R2P3Q6NXS1 205 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 NEK5Q6P3R8 708 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 IQCHQ86VS3 1027 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 PLPP6Q8IY26 295 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 SLC22A18ASQ8N1D0 253 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 SKA1Q96BD8 255 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 ZNF653Q96CK0 615 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 KCTD15Q96SI1 283 aaPredicted RBP13.27□□□□□ -0.29
LIG1-212ENST00000596549 CDC6Q99741 560 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 EDEM3Q9BZQ6 932 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 LRRC19Q9H756 370 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 ERVMER34-1Q9H9K5 563 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 HECAQ9UBI9 543 aaPredicted RBP13.27□□□□□ -0.29
LIG1-212ENST00000596549 LHX3Q9UBR4 397 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 CNOT8Q9UFF9 292 aaKnown RBP13.27□□□□□ -0.29
LIG1-212ENST00000596549 APOBEC2Q9Y235 224 aaKnown RBP13.27□□□□□ -0.29
LIG1-212ENST00000596549 FADS3Q9Y5Q0 445 aa13.27□□□□□ -0.29
LIG1-212ENST00000596549 TMEM191CA6NGB0 347 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 GOLGA8CPA6NN73 597 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 YKT6O15498 198 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 FGF10O15520 208 aaPredicted RBP13.26□□□□□ -0.29
LIG1-212ENST00000596549 LRCH4O75427 683 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 FTLP02792 175 aaPredicted RBP13.26□□□□□ -0.29
LIG1-212ENST00000596549 GZMAP12544 262 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 HNRNPA2B1P22626 353 aaKnown RBP13.26□□□□□ -0.29
LIG1-212ENST00000596549 RXRGP48443 463 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 GEMIN4P57678 1058 aaKnown RBP13.26□□□□□ -0.29
LIG1-212ENST00000596549 YBEYP58557 167 aaPredicted RBP13.26□□□□□ -0.29
LIG1-212ENST00000596549 TPI1P60174 286 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 OVGP1Q12889 678 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 BNIP3Q12983 259 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 SERINC3Q13530 473 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 KDM7AQ6ZMT4 941 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 UMODL1-AS1Q8N2C9 162 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 OXR1Q8N573 874 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 NPWQ8N729 165 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 KDF1Q8NAX2 398 aaPredicted RBP13.26□□□□□ -0.29
LIG1-212ENST00000596549 OR13H1Q8NG92 308 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 FNIP1Q8TF40 1166 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 EXOC2Q96KP1 924 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 ISCUQ9H1K1 167 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 CATSPERBQ9H7T0 1116 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 GPR27Q9NS67 375 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 FTSJ1Q9UET6 329 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 ZMIZ1Q9ULJ6 1067 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 HPCAL4Q9UM19 191 aa13.26□□□□□ -0.29
LIG1-212ENST00000596549 ARID1BQ8NFD5 2236 aaPredicted RBP13.25□□□□□ -0.29
LIG1-212ENST00000596549 A0A1W2PQJ5 194 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 ZSCAN5CA6NGD5 496 aaPredicted RBP13.25□□□□□ -0.29
LIG1-212ENST00000596549 C16orf96A6NNT2 1141 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 KRIT1O00522 736 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 RAD51BO15315 384 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 TNFSF14O43557 240 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 BUB1O43683 1085 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 AP1G1O43747 822 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 SDC3O75056 442 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 PCDH8O95206 1070 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 CAPNS1P04632 268 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 GYPCP04921 128 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 UGT2B4P06133 528 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 ITGAVP06756 1048 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 THEGLP0DJG4 465 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 TCF4P15884 667 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 MIPP30301 263 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 CLDN2P57739 230 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 SNRPD1P62314 119 aaKnown RBP13.25□□□□□ -0.29
LIG1-212ENST00000596549 STAT4Q14765 748 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 INAVAQ3KP66 663 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 PARP15Q460N3 678 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 TDRD12Q587J7 1177 aaKnown RBP13.25□□□□□ -0.29
LIG1-212ENST00000596549 ZNF805Q5CZA5 627 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 LRRC73Q5JTD7 316 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 KIAA1161Q6NSJ0 714 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 FBXL19Q6PCT2 694 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 ABI3BPQ7Z7G0 1075 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 ZNF354CQ86Y25 554 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 ARHGAP12Q8IWW6 846 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 RYBPQ8N488 228 aaPredicted RBP13.25□□□□□ -0.29
LIG1-212ENST00000596549 CELF6Q96J87 481 aaKnown RBP13.25□□□□□ -0.29
LIG1-212ENST00000596549 GDAP1L1Q96MZ0 367 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 KLHL32Q96NJ5 620 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 DHX35Q9H5Z1 703 aaKnown RBP13.25□□□□□ -0.29
LIG1-212ENST00000596549 PCSK1NQ9UHG2 260 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 SCINQ9Y6U3 715 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 IGF2RP11717 2491 aa13.25□□□□□ -0.29
LIG1-212ENST00000596549 J3KR12 359 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 EEF2KO00418 725 aaKnown RBP13.24□□□□□ -0.29
LIG1-212ENST00000596549 INSIG1O15503 277 aa13.24□□□□□ -0.29
LIG1-212ENST00000596549 IGSF6O95976 241 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms