RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 UBR1Q8IWV7 1749 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 TET3O43151 1660 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 MYOM1P52179 1685 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 ARHGAP35Q9NRY4 1499 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 A0A1W2PRQ8 180 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 TMEM247A6NEH6 219 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 ZNF814B7Z6K7 855 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 INO80B-WBP1J3KQ70 363 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 TULP3O75386 442 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 NDUFB8O95169 186 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 CHRNB1P11230 501 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 CPA1P15085 419 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 NR4A2P43354 598 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 SLC12A1Q13621 1099 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 PDE1CQ14123 709 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-216ENST00000593223 TAF12Q16514 161 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 SLC4A8Q2Y0W8 1093 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 C5orf22Q49AR2 442 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 FBXO47Q5MNV8 452 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 ENTPD8Q5MY95 495 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 PDXDC1Q6P996 788 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 MMS22LQ6ZRQ5 1243 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 GALNT7Q86SF2 657 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 PIP4P1Q86T03 277 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 BRSK2Q8IWQ3 736 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 MMP21Q8N119 569 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 C2CD4CQ8TF44 421 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 SCARB1Q8WTV0 552 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 MPP4Q96JB8 637 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 ZNF48Q96MX3 618 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-216ENST00000593223 IFT27Q9BW83 186 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMAD4-216ENST00000593223 ZNF304Q9HCX3 659 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 SEMA4BQ9NPR2 832 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-216ENST00000593223 SLC22A11Q9NSA0 550 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 ACAD8Q9UKU7 415 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 GPR52Q9Y2T5 361 aa5.29□□□□□ -1.56
SMAD4-216ENST00000593223 LY6G6EA0A0G2JKS1 128 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 IGLV5-39A0A0G2JS06 123 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 TMEM272A0A1B0GTI8 110 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 A6NNC1 897 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 H3BNX3 289 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 FIBPO43427 364 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 STRNO43815 780 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 SCP2P22307 547 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 AVPR2P30518 371 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 CCT5P48643 541 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 SRSF1Q07955 248 aaKnown RBP eCLIP5.28□□□□□ -1.56
SMAD4-216ENST00000593223 LAMB3Q13751 1172 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 ANKRD1Q15327 319 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 C1QTNF12Q5T7M4 302 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 TRAPPC11Q7Z392 1133 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 HERC6Q8IVU3 1022 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 TMEM199Q8N511 208 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 DPP10Q8N608 796 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 SLC25A28Q96A46 364 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 PPP1R10Q96QC0 940 aaKnown RBP5.28□□□□□ -1.56
SMAD4-216ENST00000593223 ALDH8A1Q9H2A2 487 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-216ENST00000593223 TASP1Q9H6P5 420 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 ACTR5Q9H9F9 607 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-216ENST00000593223 Q9N2J8 555 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 PGAP2Q9UHJ9 254 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 SUFUQ9UMX1 484 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 PCDHA12Q9UN75 941 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 DHDHQ9UQ10 334 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 DNAJC16Q9Y2G8 782 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 SQORQ9Y6N5 450 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 DGKBQ9Y6T7 804 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 RGPD1P0DJD0 1748 aa5.28□□□□□ -1.56
SMAD4-216ENST00000593223 SAC3D1A6NKF1 404 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 METTL18O95568 372 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 HSPA1AP0DMV8 641 aaKnown RBP5.27□□□□□ -1.57
SMAD4-216ENST00000593223 HSPA1BP0DMV9 641 aaKnown RBP5.27□□□□□ -1.57
SMAD4-216ENST00000593223 PSG1P11464 419 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 FCGR2AP12318 317 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 HSD3B1P14060 373 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 RRM1P23921 792 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 SLC16A2P36021 539 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 SKIV2L2P42285 1042 aaKnown RBP5.27□□□□□ -1.57
SMAD4-216ENST00000593223 ARHGAP8P85298 464 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 PRTGQ2VWP7 1150 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 PLK5Q496M5 336 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 SAMD9Q5K651 1589 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 CBWD5Q5RIA9 395 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 AAGABQ6PD74 315 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 IRF2BP2Q7Z5L9 587 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 FAM185AQ8N0U4 392 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 SLC25A41Q8N5S1 370 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 CMASQ8NFW8 434 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-216ENST00000593223 TMEM174Q8WUU8 243 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 RSPH1Q8WYR4 309 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 GCC1Q96CN9 775 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 FRMD8Q9BZ67 464 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-216ENST00000593223 HIPK3Q9H422 1215 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 IL21RQ9HBE5 538 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 SPAG4Q9NPE6 437 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 FZD3Q9NPG1 666 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 RASSF1Q9NS23 344 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 CDC42BPBQ9Y5S2 1711 aa5.27□□□□□ -1.57
SMAD4-216ENST00000593223 TNFRSF18Q9Y5U5 241 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms