RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 TMEM259Q4ZIN3 620 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 LRRC73Q5JTD7 316 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 ATXN7L2Q5T6C5 722 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-243ENST00000593128 KIAA1161Q6NSJ0 714 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 DNAJC24Q6P3W2 148 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 KDM7AQ6ZMT4 941 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 SLC22A18ASQ8N1D0 253 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 PYROXD2Q8N2H3 581 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 TMEM248Q9NWD8 314 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 GGT7Q9UJ14 662 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 ANKRD62A6NC57 917 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 POM121BA6NF01 834 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 C16orf96A6NNT2 1141 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 CREB3O43889 395 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 PIAS2O75928 621 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 NEBLO76041 1014 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 CD160O95971 181 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 CALB1P05937 261 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 UNGP13051 313 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-243ENST00000593128 ACP1P24666 158 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 ABL2P42684 1182 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 SNRPD1P62314 119 aaKnown RBP18.23■□□□□ 0.51
CIRBP-243ENST00000593128 INSM1Q01101 510 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-243ENST00000593128 MYL5Q02045 173 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 PTP4A2Q12974 167 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 ILKQ13418 452 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 EFHC2Q5JST6 749 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 MANEALQ5VSG8 457 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 WDR59Q6PJI9 974 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 ABI3BPQ7Z7G0 1075 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 SLFN11Q7Z7L1 901 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 NLRP14Q86W24 1093 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 OR4C6Q8NH72 309 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 CRELD1Q96HD1 420 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 BMFQ96LC9 184 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 KLHL32Q96NJ5 620 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 GBP4Q96PP9 640 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 MAGEH1Q9H213 219 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 ANO10Q9NW15 660 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 CLCA2Q9UQC9 943 aa18.23■□□□□ 0.51
CIRBP-243ENST00000593128 ZFYVE26Q68DK2 2539 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 ITPR1Q14643 2758 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 LGALS16A8MUM7 142 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 FPGTO14772 594 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 CCP110O43303 1012 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 EPHB2P29323 1055 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 NRG1Q02297 640 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-243ENST00000593128 PDE1CQ14123 709 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-243ENST00000593128 STX1AQ16623 288 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 ZNF805Q5CZA5 627 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 KYAT3Q6YP21 454 aaKnown RBP18.22■□□□□ 0.51
CIRBP-243ENST00000593128 PHF13Q86YI8 300 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-243ENST00000593128 OR2AP1Q8NGE2 309 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 ISG20Q96AZ6 181 aaKnown RBP18.22■□□□□ 0.51
CIRBP-243ENST00000593128 MCEEQ96PE7 176 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 AGPAT1Q99943 283 aa18.22■□□□□ 0.51
CIRBP-243ENST00000593128 LIMA1Q9UHB6 759 aaKnown RBP18.22■□□□□ 0.51
CIRBP-243ENST00000593128 KDELR3O43731 214 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 GSRP00390 522 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 RHOAP61586 193 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 MYLK3Q32MK0 819 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 TTC7BQ86TV6 843 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 DCP2Q8IU60 420 aaKnown RBP18.21■□□□□ 0.51
CIRBP-243ENST00000593128 C3orf20Q8ND61 904 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 CENPIQ92674 756 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-243ENST00000593128 GDAP1L1Q96MZ0 367 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 SCUBE2Q9NQ36 999 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 NEU3Q9UQ49 428 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 DAAM1Q9Y4D1 1078 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 HS3ST3A1Q9Y663 406 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 CACNA1GO43497 2377 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 APC2O95996 2303 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 ACACAQ13085 2346 aa18.21■□□□□ 0.51
CIRBP-243ENST00000593128 NEMP2A6NFY4 417 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 SIGLEC16A6NMB1 481 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 TMCO5BA8MYB1 307 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 H3BM21 787 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 TSPAN6O43657 245 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 AP1G1O43747 822 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 TMCC1O94876 653 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 POP4O95707 220 aaKnown RBP18.2■□□□□ 0.5
CIRBP-243ENST00000593128 IGSF6O95976 241 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 MT-CO3P00414 261 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 DESP17661 470 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 ABCG1P45844 678 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 RABIFP47224 123 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 HNRNPKP61978 463 aaKnown RBP eCLIP18.2■□□□□ 0.58e-8■□□□□ 10.2
CIRBP-243ENST00000593128 E2F1Q01094 437 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 RAD51Q06609 339 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 FZD2Q14332 565 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 DCUN1D2Q6PH85 259 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 GDPD4Q6W3E5 623 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 LRRC69Q6ZNQ3 347 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 VPS36Q86VN1 386 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 PARGQ86W56 976 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 NTAN1Q96AB6 310 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 RAB7BQ96AH8 199 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 EXOC2Q96KP1 924 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 APOLD1Q96LR9 279 aa18.2■□□□□ 0.5
CIRBP-243ENST00000593128 NCAPGQ9BPX3 1015 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms