RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 EIF2S3P41091 472 aaKnown RBP20.82■□□□□ 0.92
TRIM47-207ENST00000593089 PTPN9P43378 593 aa20.82■□□□□ 0.92
TRIM47-207ENST00000593089 CDKAL1Q5VV42 579 aa20.82■□□□□ 0.92
TRIM47-207ENST00000593089 KYAT3Q6YP21 454 aaKnown RBP20.82■□□□□ 0.92
TRIM47-207ENST00000593089 STRADAQ7RTN6 431 aa20.82■□□□□ 0.92
TRIM47-207ENST00000593089 DCP2Q8IU60 420 aaKnown RBP20.82■□□□□ 0.92
TRIM47-207ENST00000593089 CCDC185Q8N715 623 aa20.82■□□□□ 0.92
TRIM47-207ENST00000593089 DCBLD1Q8N8Z6 715 aa20.82■□□□□ 0.92
TRIM47-207ENST00000593089 FAM172AQ8WUF8 416 aa20.82■□□□□ 0.92
TRIM47-207ENST00000593089 ISG20Q96AZ6 181 aaKnown RBP20.82■□□□□ 0.92
TRIM47-207ENST00000593089 TBC1D31Q96DN5 1066 aa20.82■□□□□ 0.92
TRIM47-207ENST00000593089 IFT43Q96FT9 208 aa20.82■□□□□ 0.92
TRIM47-207ENST00000593089 BBC3Q96PG8 261 aaPredicted RBP20.82■□□□□ 0.92
TRIM47-207ENST00000593089 HPCAL4Q9UM19 191 aa20.82■□□□□ 0.92
TRIM47-207ENST00000593089 C16orf96A6NNT2 1141 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 NEMP1O14524 444 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 NEBLO76041 1014 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 MT-CO3P00414 261 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 STAT1P42224 750 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 ABL2P42684 1182 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 HDAC4P56524 1084 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 GEMIN4P57678 1058 aaKnown RBP20.81■□□□□ 0.92
TRIM47-207ENST00000593089 SGCGQ13326 291 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 FZD2Q14332 565 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 POLD3Q15054 466 aaPredicted RBP20.81■□□□□ 0.92
TRIM47-207ENST00000593089 TRIM72Q6ZMU5 477 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 LRRC69Q6ZNQ3 347 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 ZNF354CQ86Y25 554 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 CACTIN-AS1Q8N1I8 211 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 APOLD1Q96LR9 279 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 PCDHB18PQ96TA0 734 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 MAGEH1Q9H213 219 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 GPR27Q9NS67 375 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 NLGN3Q9NZ94 848 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 IPO11Q9UI26 975 aaKnown RBP20.81■□□□□ 0.92
TRIM47-207ENST00000593089 GGT7Q9UJ14 662 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 NEU3Q9UQ49 428 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 ITM2BQ9Y287 266 aa20.81■□□□□ 0.92
TRIM47-207ENST00000593089 CXorf51AA0A1B0GTR3 108 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 NEMP2A6NFY4 417 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 IGLON5A6NGN9 336 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 FPGTO14772 594 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 TSPAN6O43657 245 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 BRINP1O60477 761 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 RAMP2O60895 175 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 PLEKP08567 350 aaPredicted RBP20.8■□□□□ 0.92
TRIM47-207ENST00000593089 KRT3P12035 628 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 CKMT1AP12532 417 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 UNGP13051 313 aaPredicted RBP20.8■□□□□ 0.92
TRIM47-207ENST00000593089 RFC1P35251 1148 aaPredicted RBP20.8■□□□□ 0.92
TRIM47-207ENST00000593089 NSFP46459 744 aaKnown RBP20.8■□□□□ 0.92
TRIM47-207ENST00000593089 HNRNPKP61978 463 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRIM47-207ENST00000593089 SNRPD1P62314 119 aaKnown RBP20.8■□□□□ 0.92
TRIM47-207ENST00000593089 PTP4A2Q12974 167 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 ZNF805Q5CZA5 627 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 PLPP6Q8IY26 295 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 OR2AP1Q8NGE2 309 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 CENPIQ92674 756 aaPredicted RBP20.8■□□□□ 0.92
TRIM47-207ENST00000593089 PCMTD1Q96MG8 357 aaPredicted RBP20.8■□□□□ 0.92
TRIM47-207ENST00000593089 SELENOOQ9BVL4 669 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 RETREG1Q9H6L5 497 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 FANCLQ9NW38 375 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 ADAM22Q9P0K1 906 aa20.8■□□□□ 0.92
TRIM47-207ENST00000593089 SPTY2D1-AS1A0A0U1RR47 76 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 K7ESM1 405 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 SCAMP1O15126 338 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 RRP8O43159 456 aaKnown RBP20.79■□□□□ 0.92
TRIM47-207ENST00000593089 GSRP00390 522 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 UGT2B4P06133 528 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 GPD1P21695 349 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 RABIFP47224 123 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 PDE1CQ14123 709 aaPredicted RBP20.79■□□□□ 0.92
TRIM47-207ENST00000593089 ATXN7L2Q5T6C5 722 aaPredicted RBP20.79■□□□□ 0.92
TRIM47-207ENST00000593089 PARGQ86W56 976 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 ZNF548Q8NEK5 533 aaPredicted RBP20.79■□□□□ 0.92
TRIM47-207ENST00000593089 RAB7BQ96AH8 199 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 KLHL32Q96NJ5 620 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 KLF6Q99612 283 aaPredicted RBP20.79■□□□□ 0.92
TRIM47-207ENST00000593089 C1QTNF2Q9BXJ5 285 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 LMBRD1Q9NUN5 540 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 SEPT11Q9NVA2 429 aaKnown RBP20.79■□□□□ 0.92
TRIM47-207ENST00000593089 SIK3Q9Y2K2 1263 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 PCDHB1Q9Y5F3 818 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 IGSF10Q6WRI0 2623 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 LOC400499M0QZD8 3231 aa20.79■□□□□ 0.92
TRIM47-207ENST00000593089 H3BM21 787 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 BUB1O43683 1085 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 KDELR3O43731 214 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 OPA1O60313 960 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 CSF2P04141 144 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 NME1P15531 152 aaKnown RBP20.78■□□□□ 0.92
TRIM47-207ENST00000593089 SYCP1Q15431 976 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 CLEC16AQ2KHT3 1053 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 MYLK3Q32MK0 819 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 LRRC73Q5JTD7 316 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 TPRG1LQ5T0D9 272 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 WDR59Q6PJI9 974 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 SLFN11Q7Z7L1 901 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 ZSCAN30Q86W11 494 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 PYROXD2Q8N2H3 581 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms