RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 RETREG1Q9H6L5 497 aa22.14■■□□□ 1.13
DDX39A-215ENST00000590696 NLRC4Q9NPP4 1024 aa22.14■■□□□ 1.13
DDX39A-215ENST00000590696 GPR27Q9NS67 375 aa22.14■■□□□ 1.13
DDX39A-215ENST00000590696 FAM207AQ9NSI2 230 aaPredicted RBP22.14■■□□□ 1.13
DDX39A-215ENST00000590696 TMEM248Q9NWD8 314 aa22.14■■□□□ 1.13
DDX39A-215ENST00000590696 NLGN3Q9NZ94 848 aa22.14■■□□□ 1.13
DDX39A-215ENST00000590696 TRPM6Q9BX84 2022 aa22.14■■□□□ 1.13
DDX39A-215ENST00000590696 NEMP2A6NFY4 417 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 C2CD4BA6NLJ0 364 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 C16orf96A6NNT2 1141 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 SCAMP1O15126 338 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 RRP8O43159 456 aaKnown RBP22.13■■□□□ 1.13
DDX39A-215ENST00000590696 MYF5P13349 255 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 SOX5P35711 763 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 PTPN9P43378 593 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 HNRNPKP61978 463 aaKnown RBP eCLIP22.13■■□□□ 1.13
DDX39A-215ENST00000590696 SGCGQ13326 291 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 FZD2Q14332 565 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 LEKR1Q6ZMV7 388 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 STRADAQ7RTN6 431 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 ENOX1Q8TC92 643 aaKnown RBP22.13■■□□□ 1.13
DDX39A-215ENST00000590696 MAGEH1Q9H213 219 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 HPCAL4Q9UM19 191 aa22.13■■□□□ 1.13
DDX39A-215ENST00000590696 SPTY2D1-AS1A0A0U1RR47 76 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 IGLON5A6NGN9 336 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 K7ESM1 405 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 KRIT1O00522 736 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 FPGTO14772 594 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 EPHB6O15197 1021 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 TSPAN6O43657 245 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 NEBLO76041 1014 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 LRIG2O94898 1065 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 PLEKP08567 350 aaPredicted RBP22.12■■□□□ 1.13
DDX39A-215ENST00000590696 ABL2P42684 1182 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 RABIFP47224 123 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 JAM2P57087 298 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 GEMIN4P57678 1058 aaKnown RBP22.12■■□□□ 1.13
DDX39A-215ENST00000590696 POLD3Q15054 466 aaPredicted RBP22.12■■□□□ 1.13
DDX39A-215ENST00000590696 KRT31Q15323 416 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 ZSCAN30Q86W11 494 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 CCDC185Q8N715 623 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 OR2AP1Q8NGE2 309 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 SNIP1Q8TAD8 396 aaKnown RBP22.12■■□□□ 1.13
DDX39A-215ENST00000590696 BAP1Q92560 729 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 CENPIQ92674 756 aaPredicted RBP22.12■■□□□ 1.13
DDX39A-215ENST00000590696 FGF11Q92914 225 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 RAB7BQ96AH8 199 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 TBC1D31Q96DN5 1066 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 LENG8Q96PV6 779 aaPredicted RBP22.12■■□□□ 1.13
DDX39A-215ENST00000590696 KLF6Q99612 283 aaPredicted RBP22.12■■□□□ 1.13
DDX39A-215ENST00000590696 C1QTNF2Q9BXJ5 285 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 IPO11Q9UI26 975 aaKnown RBP22.12■■□□□ 1.13
DDX39A-215ENST00000590696 GGT7Q9UJ14 662 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 NEU3Q9UQ49 428 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 PCDHB1Q9Y5F3 818 aa22.12■■□□□ 1.13
DDX39A-215ENST00000590696 EIF4E1BA6NMX2 242 aaKnown RBP22.11■■□□□ 1.13
DDX39A-215ENST00000590696 NEMP1O14524 444 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 OPA1O60313 960 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 RAMP2O60895 175 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 GSRP00390 522 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 CSF2P04141 144 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 TPM2P07951 284 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 DUSP3P51452 185 aaPredicted RBP22.11■■□□□ 1.13
DDX39A-215ENST00000590696 HDAC4P56524 1084 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 SNRPD1P62314 119 aaKnown RBP22.11■■□□□ 1.13
DDX39A-215ENST00000590696 PTP4A2Q12974 167 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 ZNF805Q5CZA5 627 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 CDKAL1Q5VV42 579 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 TRIM72Q6ZMU5 477 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 PARGQ86W56 976 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 FAM181AQ8N9Y4 354 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 FAM172AQ8WUF8 416 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 PCDHB18PQ96TA0 734 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 DUSP23Q9BVJ7 150 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 ITM2BQ9Y287 266 aa22.11■■□□□ 1.13
DDX39A-215ENST00000590696 SMG1Q96Q15 3661 aaKnown RBP22.1■■□□□ 1.13
DDX39A-215ENST00000590696 LY6G6EA0A0G2JKS1 128 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 H3BM21 787 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 POP4O95707 220 aaKnown RBP22.1■■□□□ 1.13
DDX39A-215ENST00000590696 UGT2B4P06133 528 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 KRT3P12035 628 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 UNGP13051 313 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-215ENST00000590696 NME1P15531 152 aaKnown RBP22.1■■□□□ 1.13
DDX39A-215ENST00000590696 RFC1P35251 1148 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-215ENST00000590696 ACTN2P35609 894 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 STAT1P42224 750 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 PDE1CQ14123 709 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-215ENST00000590696 MYLK3Q32MK0 819 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 FKBP15Q5T1M5 1219 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 CDCP2Q5VXM1 449 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 ZNF548Q8NEK5 533 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-215ENST00000590696 VOPP1Q96AW1 172 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 KLHL32Q96NJ5 620 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 PRORYQ9H606 182 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 USP29Q9HBJ7 922 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 ADAM22Q9P0K1 906 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 KLF15Q9UIH9 416 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 RAI2Q9Y5P3 530 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 U3KQA8 63 aa22.1■■□□□ 1.13
DDX39A-215ENST00000590696 CHD5Q8TDI0 1954 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms