RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 EXOC2Q96KP1 924 aa21.63■■□□□ 1.05
ATG4D-212ENST00000590096 ALS2CR12Q96Q35 445 aa21.63■■□□□ 1.05
ATG4D-212ENST00000590096 HINFPQ9BQA5 517 aa21.63■■□□□ 1.05
ATG4D-212ENST00000590096 GPR174Q9BXC1 333 aa21.63■■□□□ 1.05
ATG4D-212ENST00000590096 DTLQ9NZJ0 730 aa21.63■■□□□ 1.05
ATG4D-212ENST00000590096 SERGEFQ9UGK8 458 aa21.63■■□□□ 1.05
ATG4D-212ENST00000590096 SEPT3Q9UH03 358 aa21.63■■□□□ 1.05
ATG4D-212ENST00000590096 hCG_1818297A0A087WSY0 165 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 GFRA3O60609 400 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 KRT10P13645 584 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 RENBPP51606 427 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 COPS2P61201 443 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 LLGL1Q15334 1064 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 PPP2R5EQ16537 467 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 ASCL5Q7RTU5 278 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 DEFB119Q8N690 84 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 CCNYQ8ND76 341 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 NEUROG2Q9H2A3 272 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 EVLQ9UI08 416 aaPredicted RBP21.62■■□□□ 1.05
ATG4D-212ENST00000590096 CEP192Q8TEP8 1941 aa21.62■■□□□ 1.05
ATG4D-212ENST00000590096 SDK1Q7Z5N4 2213 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 CST8O60676 142 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 SEMA4FO95754 770 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 RETP07949 1114 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 TGM2P21980 687 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 CCNCP24863 283 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 ACSL1P33121 698 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 DRD3P35462 400 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 HSPA9P38646 679 aaKnown RBP21.61■■□□□ 1.05
ATG4D-212ENST00000590096 PEX5P50542 639 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 METAP1P53582 386 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 SLC10A7Q0GE19 358 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 SLC10A2Q12908 348 aaPredicted RBP21.61■■□□□ 1.05
ATG4D-212ENST00000590096 GRM3Q14832 879 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 MARC1Q5VT66 337 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.61■■□□□ 1.05
ATG4D-212ENST00000590096 BZW1Q7L1Q6 419 aaKnown RBP21.61■■□□□ 1.05
ATG4D-212ENST00000590096 ARMCX6Q7L4S7 300 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 TSEN2Q8NCE0 465 aaKnown RBP21.61■■□□□ 1.05
ATG4D-212ENST00000590096 UBE2Q2Q8WVN8 375 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 RUBCNQ92622 972 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 FOXJ1Q92949 421 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 HDAC11Q96DB2 347 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 TSGA13Q96PP4 275 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 OSBPL1AQ9BXW6 950 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 KCNF1Q9H3M0 494 aa21.61■■□□□ 1.05
ATG4D-212ENST00000590096 PACSIN2Q9UNF0 486 aaPredicted RBP21.61■■□□□ 1.05
ATG4D-212ENST00000590096 LRRC72A6NJI9 287 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 PLK4O00444 970 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 PPP1R12AO14974 1030 aaPredicted RBP21.6■■□□□ 1.05
ATG4D-212ENST00000590096 SLC7A4O43246 635 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 NEBLO76041 1014 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 EPN2O95208 641 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 GKP32189 559 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 ZNF33AQ06730 810 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 CCDC173Q0VFZ6 552 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 CNTN1Q12860 1018 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 PDK1Q15118 436 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 LYSMD4Q5XG99 296 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 NPNTQ6UXI9 565 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 CYP2U1Q7Z449 544 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 CADM4Q8NFZ8 388 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 OR14C36Q8NHC7 312 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 ARRDC3Q96B67 414 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 HSPA12BQ96MM6 686 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 PSKH2Q96QS6 385 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 PCED1AQ9H1Q7 454 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 HAUS2Q9NVX0 235 aa21.6■■□□□ 1.05
ATG4D-212ENST00000590096 NUMA1Q14980 2115 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 FAM47DPA6NHR8 397 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 MEI4A8MW99 385 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 MATN3O15232 486 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 ZSCAN12O43309 604 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 PEX11BO96011 259 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 UGT2B4P06133 528 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 ITGB7P26010 798 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 PTGER3P43115 390 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 MMP13P45452 471 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 CSNK1DP48730 415 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 NR2C2P49116 596 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 CREB5Q02930 508 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 NSUN2Q08J23 767 aaKnown RBP eCLIP21.59■■□□□ 1.05
ATG4D-212ENST00000590096 HNRNPDQ14103 355 aaKnown RBP21.59■■□□□ 1.05
ATG4D-212ENST00000590096 SYCP2LQ5T4T6 812 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 CCDC181Q5TID7 509 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 ERN2Q76MJ5 926 aaKnown RBP21.59■■□□□ 1.05
ATG4D-212ENST00000590096 SRLQ86TD4 932 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 CCDC13Q8IYE1 715 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 ALG3Q92685 438 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 ZNF419Q96HQ0 510 aaPredicted RBP21.59■■□□□ 1.05
ATG4D-212ENST00000590096 HES6Q96HZ4 224 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 HEMGNQ9BXL5 484 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 HDAC8Q9BY41 377 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 CPEB1Q9BZB8 566 aaKnown RBP21.59■■□□□ 1.05
ATG4D-212ENST00000590096 PCDHGA5Q9Y5G8 931 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 GPR179Q6PRD1 2367 aa21.59■■□□□ 1.05
ATG4D-212ENST00000590096 INSIG1O15503 277 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 PTPN7P35236 360 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 DPP6P42658 865 aa21.58■■□□□ 1.05
ATG4D-212ENST00000590096 MAPK8P45983 427 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms