RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 HSPA12BQ96MM6 686 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 GDAP1L1Q96MZ0 367 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 C6orf106Q9H6K1 298 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 EVLQ9UI08 416 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 PCDHGA5Q9Y5G8 931 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 KRIT1O00522 736 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 MUSKO15146 869 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 INSIG1O15503 277 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 ZRANB2O95218 330 aaKnown RBP eCLIP20.5■□□□□ 0.873e-7■■■■□ 25.7
DDX39A-207ENST00000588542 IGSF6O95976 241 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 KRT10P13645 584 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 ITPKAP23677 461 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 ADCY2Q08462 1091 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 GSE1Q14687 1217 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 LBRQ14739 615 aaKnown RBP20.5■□□□□ 0.87
DDX39A-207ENST00000588542 ODF2Q5BJF6 829 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 PLA2G2CQ5R387 149 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 TMCO4Q5TGY1 634 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 LYSMD4Q5XG99 296 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 ZNF662Q6ZS27 426 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 RFX6Q8HWS3 928 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 RCOR2Q8IZ40 523 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 RYBPQ8N488 228 aaPredicted RBP20.5■□□□□ 0.87
DDX39A-207ENST00000588542 TSGA13Q96PP4 275 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 MAK16Q9BXY0 300 aaKnown RBP20.5■□□□□ 0.87
DDX39A-207ENST00000588542 TSGA10Q9BZW7 698 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 PARD6AQ9NPB6 346 aa20.5■□□□□ 0.87
DDX39A-207ENST00000588542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.5■□□□□ 0.87
DDX39A-207ENST00000588542 hCG_1818297A0A087WSY0 165 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 METTL12A8MUP2 240 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 APOL1O14791 398 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 KRT86O43790 486 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 CCDC175P0C221 793 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 HOXD11P31277 338 aaPredicted RBP20.49■□□□□ 0.87
DDX39A-207ENST00000588542 ADPRHP54922 357 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 CREB5Q02930 508 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 SPEM2Q0P670 501 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 LLGL1Q15334 1064 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 CCDC6Q16204 474 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 PIP5KL1Q5T9C9 394 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 NPNTQ6UXI9 565 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 CYP2U1Q7Z449 544 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.49■□□□□ 0.87
DDX39A-207ENST00000588542 LRRN4Q8WUT4 740 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 ALG3Q92685 438 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 FOXJ1Q92949 421 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 RBM41Q96IZ5 413 aaKnown RBP20.49■□□□□ 0.87
DDX39A-207ENST00000588542 LRIG1Q96JA1 1093 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 PSKH2Q96QS6 385 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 CINPQ9BW66 212 aaPredicted RBP20.49■□□□□ 0.87
DDX39A-207ENST00000588542 HDAC8Q9BY41 377 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 PCED1AQ9H1Q7 454 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 TMEM74BQ9NUR3 256 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 SEPT3Q9UH03 358 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 AMFRQ9UKV5 643 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 GUCA1BQ9UMX6 200 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 ADAMTS9Q9P2N4 1935 aa20.49■□□□□ 0.87
DDX39A-207ENST00000588542 CFAP54Q96N23 3096 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 PTPRZ1P23471 2315 aaPredicted RBP20.48■□□□□ 0.87
DDX39A-207ENST00000588542 CCDC66A2RUB6 948 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 SLC7A4O43246 635 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 PLRG1O43660 514 aaKnown RBP20.48■□□□□ 0.87
DDX39A-207ENST00000588542 NRDCO43847 1150 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 LRP3O75074 770 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 FTCDO95954 541 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 ZFXP17010 805 aaPredicted RBP20.48■□□□□ 0.87
DDX39A-207ENST00000588542 CCNCP24863 283 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 ITGB7P26010 798 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 MPLP40238 635 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 CSNK1DP48730 415 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 TAS2R38P59533 333 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 NSUN2Q08J23 767 aaKnown RBP eCLIP20.48■□□□□ 0.87
DDX39A-207ENST00000588542 TFDP3Q5H9I0 405 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 DCAF12L1Q5VU92 463 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 PEAR1Q5VY43 1037 aaPredicted RBP20.48■□□□□ 0.87
DDX39A-207ENST00000588542 NCEH1Q6PIU2 408 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 PEX26Q7Z412 305 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 SYCE1Q8N0S2 351 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 PGBD5Q8N414 524 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 TEX26Q8N6G2 289 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 OR2T34Q8NGX1 318 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 OR14C36Q8NHC7 312 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 DNASE2BQ8WZ79 361 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 MAML1Q92585 1016 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 FATE1Q969F0 183 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 HDAC11Q96DB2 347 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 NSMCE3Q96MG7 304 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 HINFPQ9BQA5 517 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 CPEB1Q9BZB8 566 aaKnown RBP20.48■□□□□ 0.87
DDX39A-207ENST00000588542 KCNF1Q9H3M0 494 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 PILRBQ9UKJ0 227 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 HEY1Q9Y5J3 304 aa20.48■□□□□ 0.87
DDX39A-207ENST00000588542 GJB3O75712 270 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 UGT2B4P06133 528 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 IGHV4-34P06331 123 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 MX2P20592 715 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 DYNLT1P63172 113 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 RAD51Q06609 339 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 PPP2R5EQ16537 467 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 ZNF805Q5CZA5 627 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms