RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 USP30Q70CQ3 517 aa21.77■■□□□ 1.08
RETREG3-204ENST00000586796 B4GALNT4Q76KP1 1039 aa21.77■■□□□ 1.08
RETREG3-204ENST00000586796 ASCL5Q7RTU5 278 aa21.77■■□□□ 1.08
RETREG3-204ENST00000586796 LRRC49Q8IUZ0 686 aa21.77■■□□□ 1.08
RETREG3-204ENST00000586796 PLPP6Q8IY26 295 aa21.77■■□□□ 1.08
RETREG3-204ENST00000586796 ARRDC3Q96B67 414 aa21.77■■□□□ 1.08
RETREG3-204ENST00000586796 ZC3H10Q96K80 434 aaKnown RBP21.77■■□□□ 1.08
RETREG3-204ENST00000586796 DYRK4Q9NR20 520 aa21.77■■□□□ 1.08
RETREG3-204ENST00000586796 TRMT1Q9NXH9 659 aaKnown RBP21.77■■□□□ 1.08
RETREG3-204ENST00000586796 TTC24A2A3L6 582 aaPredicted RBP21.76■■□□□ 1.07
RETREG3-204ENST00000586796 MUSKO15146 869 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 DDX3YO15523 660 aaKnown RBP21.76■■□□□ 1.07
RETREG3-204ENST00000586796 PEX11BO96011 259 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 C7P10643 843 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 DRD3P35462 400 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 CETN2P41208 172 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 COPS2P61201 443 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 CNTN1Q12860 1018 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 PPP2R5EQ16537 467 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 CCDC181Q5TID7 509 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 MARC1Q5VT66 337 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 LAIR1Q6GTX8 287 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 TIGD7Q6NT04 549 aaPredicted RBP21.76■■□□□ 1.07
RETREG3-204ENST00000586796 BBS5Q8N3I7 341 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 OR14C36Q8NHC7 312 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 LGMNQ99538 433 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 HINFPQ9BQA5 517 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 NCDNQ9UBB6 729 aa21.76■■□□□ 1.07
RETREG3-204ENST00000586796 PRR23AA6NEV1 266 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 GJB3O75712 270 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 NEBLO76041 1014 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 SEMA4FO95754 770 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 UGT2B4P06133 528 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 PECAM1P16284 738 aaPredicted RBP21.75■■□□□ 1.07
RETREG3-204ENST00000586796 CCNCP24863 283 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 PTGER3P43115 390 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 MMP13P45452 471 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 SCNN1BP51168 640 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 MAXP61244 160 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 AP1B1Q10567 949 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 PDK1Q15118 436 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 CCDC13Q8IYE1 715 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 P3H4Q92791 437 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 HDAC11Q96DB2 347 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 HES6Q96HZ4 224 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 PPP1R16AQ96I34 528 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 OSBPL8Q9BZF1 889 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 SGK2Q9HBY8 427 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 GMEB2Q9UKD1 530 aa21.75■■□□□ 1.07
RETREG3-204ENST00000586796 MATN3O15232 486 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 ZSCAN12O43309 604 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 PIGNO95427 931 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 TGM2P21980 687 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 RENBPP51606 427 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 CREB5Q02930 508 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 ITKQ08881 620 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 GDPD4Q6W3E5 623 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 SRLQ86TD4 932 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 PGBD5Q8N414 524 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.74■■□□□ 1.07
RETREG3-204ENST00000586796 HSPA12BQ96MM6 686 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 KLHL32Q96NJ5 620 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 TSGA13Q96PP4 275 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 PSKH2Q96QS6 385 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 HERPUD2Q9BSE4 406 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 C6orf106Q9H6K1 298 aaPredicted RBP21.74■■□□□ 1.07
RETREG3-204ENST00000586796 NT5MQ9NPB1 228 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 SEPT10Q9P0V9 454 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 FZD4Q9ULV1 537 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 TTLL3Q9Y4R7 772 aa21.74■■□□□ 1.07
RETREG3-204ENST00000586796 CACNA1HO95180 2353 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 MEI4A8MW99 385 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 KCNK1O00180 336 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 PPP1R12AO14974 1030 aaPredicted RBP21.73■■□□□ 1.07
RETREG3-204ENST00000586796 PLA2G5P39877 138 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 NR2C2P49116 596 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 ZNF33AQ06730 810 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 PPIDQ08752 370 aaKnown RBP21.73■■□□□ 1.07
RETREG3-204ENST00000586796 RPS6KA1Q15418 735 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 CCDC6Q16204 474 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 FAM182AQ5T1J6 154 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 MEI1Q5TIA1 1274 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 LYSMD4Q5XG99 296 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 BBS12Q6ZW61 710 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 ERN2Q76MJ5 926 aaKnown RBP21.73■■□□□ 1.07
RETREG3-204ENST00000586796 BZW1Q7L1Q6 419 aaKnown RBP21.73■■□□□ 1.07
RETREG3-204ENST00000586796 ZC3H18Q86VM9 953 aaKnown RBP21.73■■□□□ 1.07
RETREG3-204ENST00000586796 SLC41A1Q8IVJ1 513 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 REXO1L1PQ8IX06 675 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 SNX19Q92543 992 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 LRIG1Q96JA1 1093 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 OSBPL1AQ9BXW6 950 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 ARRDC1-AS1Q9H2J1 176 aa21.73■■□□□ 1.07
RETREG3-204ENST00000586796 RBM22Q9NW64 420 aaKnown RBP eCLIP21.73■■□□□ 1.074e-8■■■■□ 23.7
RETREG3-204ENST00000586796 TBC1D3DA0A087WVF3 549 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TBC1D3IA0A087WXS9 549 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TBC1D3EA0A087X179 549 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TBC1D3KA0A087X1G2 549 aa21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TBC1D3FA6NER0 549 aaPredicted RBP21.72■■□□□ 1.07
RETREG3-204ENST00000586796 TBC1D3LB9A6J9 549 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms