RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	C5orf22	Q49AR2	442 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	CARD16	Q5EG05	197 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	PRRT3	Q5FWE3	981 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	FAM102A	Q5T9C2	384 aa	Predicted RBP	9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	RETSAT	Q6NUM9	610 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	CCDC81	Q6ZN84	652 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	ENOSF1	Q7L5Y1	443 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	SLC26A9	Q7LBE3	791 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	SLC47A2	Q86VL8	602 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	VPS36	Q86VN1	386 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	ZNF683	Q8IZ20	524 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	IFT43	Q96FT9	208 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	FEM1C	Q96JP0	617 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	TIGD1	Q96MW7	591 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	NPY6R	Q99463	290 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	HEPH	Q9BQS7	1158 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	USP29	Q9HBJ7	922 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	ARHGEF38	Q9NXL2	777 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	HS3ST3A1	Q9Y663	406 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466	ANKRD36	A6QL64	1941 aa		9.8	□□□□□ -0.84
MSI2-208	ENST00000579466		B8ZZF3	427 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	KRIT1	O00522	736 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	ZNF821	O75541	412 aa	Predicted RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	GCAT	O75600	419 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	UGT2B4	P06133	528 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	CELA2B	P08218	269 aa	Predicted RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	FLT3	P36888	993 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	ACVRL1	P37023	503 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	CXCR3	P49682	368 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	ADK	P55263	362 aa	Known RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	MARS	P56192	900 aa	Known RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	PTK2	Q05397	1052 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	SRSF6	Q13247	344 aa	Known RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	CLN3	Q13286	438 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	MTA1	Q13330	715 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	MORC3	Q14149	939 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	SPIDR	Q14159	915 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	BRMS1L	Q5PSV4	323 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	C6orf132	Q5T0Z8	1188 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	TAF3	Q5VWG9	929 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	GBP6	Q6ZN66	633 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	SETD3	Q86TU7	594 aa	Predicted RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	FAM131B	Q86XD5	332 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	JAML	Q86YT9	394 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	DCP2	Q8IU60	420 aa	Known RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	SLC35F3	Q8IY50	421 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	PHACTR4	Q8IZ21	702 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	PCDH20	Q8N6Y1	951 aa	Known RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	NETO2	Q8NC67	525 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	SHC3	Q92529	594 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	SLC46A1	Q96NT5	459 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	KLF6	Q99612	283 aa	Predicted RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	CCDC3	Q9BQI4	270 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	LRRC61	Q9BV99	259 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	DPH1	Q9BZG8	443 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	CLMP	Q9H6B4	373 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	EPB41L5	Q9HCM4	733 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	GPR27	Q9NS67	375 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	HECA	Q9UBI9	543 aa	Predicted RBP	9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	GULP1	Q9UBP9	304 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	PCDHGC3	Q9UN70	934 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	AHCTF1	Q8WYP5	2266 aa		9.79	□□□□□ -0.84
MSI2-208	ENST00000579466	LRP4	O75096	1905 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	ILVBL	A1L0T0	632 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	EME2	A4GXA9	379 aa	Predicted RBP	9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	DRGX	A6NNA5	263 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	C16orf96	A6NNT2	1141 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466		K7ENP7	123 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	ZMPSTE24	O75844	475 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	ANXA6	P08133	673 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	HGF	P14210	728 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	IGFALS	P35858	605 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	PDX1	P52945	283 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	ATP11A	P98196	1134 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	NFKB2	Q00653	900 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	GNA12	Q03113	381 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	NFATC3	Q12968	1075 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	RAPGEF1	Q13905	1077 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	CDO1	Q16878	200 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	EXOC3L4	Q17RC7	722 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	FAXC	Q5TGI0	409 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	RWDD4	Q6NW29	188 aa	Known RBP	9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	INO80C	Q6PI98	192 aa	Predicted RBP	9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	RD3	Q7Z3Z2	195 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	PHLDB2	Q86SQ0	1253 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	ZNF354C	Q86Y25	554 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	ARL14	Q8N4G2	192 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	WDR36	Q8NI36	951 aa	Known RBP	9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	FAM174A	Q8TBP5	190 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	MED8	Q96G25	268 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	WBP1	Q96G27	269 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	PRR11	Q96HE9	360 aa	Predicted RBP	9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	CFAP57	Q96MR6	1250 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	WRAP53	Q9BUR4	548 aa	Known RBP	9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	FOXP3	Q9BZS1	431 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	ZYG11B	Q9C0D3	744 aa		9.78	□□□□□ -0.84
MSI2-208	ENST00000579466	NCKIPSD	Q9NZQ3	722 aa		9.78	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms