RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 ZNF605Q86T29 641 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 SETD3Q86TU7 594 aaPredicted RBP12.3□□□□□ -0.44
TRIM25-207ENST00000573108 DCAF4L2Q8NA75 395 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 TMEM35BQ8NCS4 154 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 ZNF397Q8NF99 534 aaPredicted RBP12.3□□□□□ -0.44
TRIM25-207ENST00000573108 IFI44Q8TCB0 444 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 CPA5Q8WXQ8 436 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 DEPDC7Q96QD5 511 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 TBCBQ99426 244 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 SLC17A9Q9BYT1 436 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 PDCL3Q9H2J4 239 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 SYNCQ9H7C4 482 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 GPR27Q9NS67 375 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.3□□□□□ -0.442e-9■□□□□ 9.6
TRIM25-207ENST00000573108 KLF15Q9UIH9 416 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 ACTL7AQ9Y615 435 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 HS3ST3A1Q9Y663 406 aa12.3□□□□□ -0.44
TRIM25-207ENST00000573108 IGLV3-10A0A075B6K4 115 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 A0A1W2PNU3 283 aaPredicted RBP12.29□□□□□ -0.44
TRIM25-207ENST00000573108 CASC3O15234 703 aaKnown RBP12.29□□□□□ -0.44
TRIM25-207ENST00000573108 ZMPSTE24O75844 475 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 DXOO77932 396 aaKnown RBP12.29□□□□□ -0.44
TRIM25-207ENST00000573108 GP1BAP07359 652 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 ADRB3P13945 408 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 TGM2P21980 687 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 STAT1P42224 750 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 GABRB2P47870 512 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 LSSP48449 732 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 CLCN6P51797 869 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 NEK3P51956 506 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 FMO1Q01740 532 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 CDR2Q01850 454 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 DEUP1Q05D60 604 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 NR1I3Q14994 352 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 BRMS1LQ5PSV4 323 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 ARHGAP40Q5TG30 622 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 FAM181AQ8N9Y4 354 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 ZNF548Q8NEK5 533 aaPredicted RBP12.29□□□□□ -0.44
TRIM25-207ENST00000573108 MAPK15Q8TD08 544 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 NT5C3BQ969T7 300 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 C18orf8Q96DM3 657 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 IFT43Q96FT9 208 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 PPP1R16AQ96I34 528 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 PCDHB18PQ96TA0 734 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 SPON2Q9BUD6 331 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 ABCG4Q9H172 646 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 POLR1BQ9H9Y6 1135 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 ASCL3Q9NQ33 180 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 ZNF212Q9UDV6 495 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 FADS3Q9Y5Q0 445 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 PIEZO2Q9H5I5 2752 aa12.29□□□□□ -0.44
TRIM25-207ENST00000573108 SPTY2D1-AS1A0A0U1RR47 76 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 A0A1B0GTH6 734 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 NEMP2A6NFY4 417 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 ERVH48-1M5A8F1 160 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 SPINT1O43278 529 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 SRGAP2O75044 1071 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 CD160O95971 181 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 CSF2P04141 144 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 NME1P15531 152 aaKnown RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 ITGB7P26010 798 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 OR1E1P30953 314 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 RECQLP46063 649 aaPredicted RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 SERPINH1P50454 418 aaKnown RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 DUSP3P51452 185 aaPredicted RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 DNA2P51530 1060 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 CCNHP51946 323 aaPredicted RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 TMPRSS3P57727 454 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 HNRNPKP61978 463 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 RPS21P63220 83 aaKnown RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 NOMO3P69849 1222 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 ARF5P84085 180 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 CDKN3Q16667 212 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 TAF1BQ53T94 588 aaPredicted RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 C3orf38Q5JPI3 329 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 NAA35Q5VZE5 725 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 KIAA1161Q6NSJ0 714 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 TRNP1Q6NT89 227 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 GUSBP11Q6P575 273 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 CRTC1Q6UUV9 634 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 KYAT3Q6YP21 454 aaKnown RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 PARS2Q7L3T8 475 aaKnown RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 ZNF677Q86XU0 584 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 XYLT1Q86Y38 959 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 LSMEM2Q8N112 164 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 SLC30A5Q8TAD4 765 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 KCNE4Q8WWG9 221 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 PGAP3Q96FM1 320 aaPredicted RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 VCPIP1Q96JH7 1222 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 C1orf74Q96LT6 269 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 KLF6Q99612 283 aaPredicted RBP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRIM25-207ENST00000573108 DUSP23Q9BVJ7 150 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 SEMA4CQ9C0C4 833 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 ATP13A1Q9HD20 1204 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 RRN3Q9NYV6 651 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 GGT7Q9UJ14 662 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 STAP1Q9ULZ2 295 aa12.28□□□□□ -0.44
TRIM25-207ENST00000573108 SATB2Q9UPW6 733 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms