RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 USP8P40818 1118 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 RPIAP49247 311 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 CCNHP51946 323 aaPredicted RBP20.22■□□□□ 0.83
CCDC40-206ENST00000572083 ADKP55263 362 aaKnown RBP20.22■□□□□ 0.83
CCDC40-206ENST00000572083 C1QBPQ07021 282 aaKnown RBP20.22■□□□□ 0.83
CCDC40-206ENST00000572083 SGCGQ13326 291 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 TTI2Q6NXR4 508 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 C1orf131Q8NDD1 294 aaKnown RBP20.22■□□□□ 0.83
CCDC40-206ENST00000572083 BTN2A2Q8WVV5 523 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 GLMNQ92990 594 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 NAT6Q93015 286 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 DHTKD1Q96HY7 919 aaPredicted RBP20.22■□□□□ 0.83
CCDC40-206ENST00000572083 HEPHQ9BQS7 1158 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 LRRC61Q9BV99 259 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 ZDHHC6Q9H6R6 413 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 TMPRSS4Q9NRS4 437 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 ARHGEF38Q9NXL2 777 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 SPASTQ9UBP0 616 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 IL17BQ9UHF5 180 aa20.22■□□□□ 0.83
CCDC40-206ENST00000572083 BECN2A8MW95 431 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 AP1G1O43747 822 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 OR1E1P30953 314 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 NOS2P35228 1153 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 MLLT3P42568 568 aaPredicted RBP20.21■□□□□ 0.83
CCDC40-206ENST00000572083 ABL2P42684 1182 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 SERPINH1P50454 418 aaKnown RBP20.21■□□□□ 0.83
CCDC40-206ENST00000572083 PFN3P60673 137 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 SRSF6Q13247 344 aaKnown RBP20.21■□□□□ 0.83
CCDC40-206ENST00000572083 LINC00303Q3SY05 128 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 B3GNT8Q7Z7M8 397 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 PHACTR4Q8IZ21 702 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 WDR48Q8TAF3 677 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 EXTL1Q92935 676 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 LENG8Q96PV6 779 aaPredicted RBP20.21■□□□□ 0.83
CCDC40-206ENST00000572083 SPON2Q9BUD6 331 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 C1QTNF2Q9BXJ5 285 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 WDCPQ9H6R7 721 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 EPB41L5Q9HCM4 733 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 FCF1Q9Y324 198 aaKnown RBP20.21■□□□□ 0.83
CCDC40-206ENST00000572083 ACTL7AQ9Y615 435 aa20.21■□□□□ 0.83
CCDC40-206ENST00000572083 NEMP1O14524 444 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 PLD2O14939 933 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 SLC5A2P31639 672 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 GKP32189 559 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 SULT1E1P49888 294 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 THOP1P52888 689 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 TGIF1Q15583 401 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 ARHGAP44Q17R89 818 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 CARD16Q5EG05 197 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 BRMS1LQ5PSV4 323 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 SLC26A9Q7LBE3 791 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 JAMLQ86YT9 394 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 PCDH20Q8N6Y1 951 aaKnown RBP20.2■□□□□ 0.82
CCDC40-206ENST00000572083 OR6K2Q8NGY2 324 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 NELFBQ8WX92 580 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 LIN37Q96GY3 246 aaPredicted RBP20.2■□□□□ 0.82
CCDC40-206ENST00000572083 TM6SF2Q9BZW4 377 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 CEP44Q9C0F1 390 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 CLPBQ9H078 707 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 ATP13A1Q9HD20 1204 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 CTNND2Q9UQB3 1225 aa20.2■□□□□ 0.82
CCDC40-206ENST00000572083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.2■□□□□ 0.82
CCDC40-206ENST00000572083 DRGXA6NNA5 263 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 LMO7DNF2Z398 122 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 ZMPSTE24O75844 475 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 ANXA6P08133 673 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 CELA2BP08218 269 aaPredicted RBP20.19■□□□□ 0.82
CCDC40-206ENST00000572083 HGFP14210 728 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 CXCR3P49682 368 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 RNASE9P60153 205 aaKnown RBP20.19■□□□□ 0.82
CCDC40-206ENST00000572083 ARF5P84085 180 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 SLC6A3Q01959 620 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 APBA1Q02410 837 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 TCEA2Q15560 299 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 PTPN20Q4JDL3 420 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 RETSATQ6NUM9 610 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 LRRC31Q6UY01 552 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 USP53Q70EK8 1073 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 ENOSF1Q7L5Y1 443 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 DENND6BQ8NEG7 585 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 NPY6RQ99463 290 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 ARHGAP9Q9BRR9 750 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 FOXP3Q9BZS1 431 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 SLC13A1Q9BZW2 595 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 SYNCQ9H7C4 482 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 RABGEF1Q9UJ41 708 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 MAN1B1Q9UKM7 699 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 PADI4Q9UM07 663 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 ATP6V1DQ9Y5K8 247 aa20.19■□□□□ 0.82
CCDC40-206ENST00000572083 C16orf96A6NNT2 1141 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 NTN3O00634 580 aaPredicted RBP20.18■□□□□ 0.82
CCDC40-206ENST00000572083 TERTO14746 1132 aaKnown RBP20.18■□□□□ 0.82
CCDC40-206ENST00000572083 YY2O15391 372 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 TSPAN6O43657 245 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 SRGAP2O75044 1071 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 GJB6O95452 261 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 TSHRP16473 764 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 UGT1A5P35504 534 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 IGFALSP35858 605 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 ESRP1Q6NXG1 681 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms