RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 C1orf61Q13536 156 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 PDE1CQ14123 709 aaPredicted RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 TCEA2Q15560 299 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 DEFB133Q30KQ1 61 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 TBC1D25Q3MII6 688 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 ATXN7L2Q5T6C5 722 aaPredicted RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZNF354CQ86Y25 554 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 SPACA3Q8IXA5 215 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 RBFAQ8N0V3 343 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 PCDH20Q8N6Y1 951 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZNF548Q8NEK5 533 aaPredicted RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 JOSD2Q8TAC2 188 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 SNIP1Q8TAD8 396 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 MAPK15Q8TD08 544 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 LMX1AQ8TE12 382 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 EPS8L1Q8TE68 723 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 RXFP2Q8WXD0 754 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 UBL7Q96S82 380 aaPredicted RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 LGMNQ99538 433 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 C11orf70Q9BRQ4 267 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 NAA15Q9BXJ9 866 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 CEP44Q9C0F1 390 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 TCEAL2Q9H3H9 227 aaPredicted RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 CLSTN2Q9H4D0 955 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 NLGN3Q9NZ94 848 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 OR12D3Q9UGF7 316 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 HS3ST3A1Q9Y663 406 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 U3KQA8 63 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 FLNBO75369 2602 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 GCN1Q92616 2671 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 SPTY2D1-AS1A0A0U1RR47 76 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 NEMP2A6NFY4 417 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 FPGTO14772 594 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 C1QL1O75973 258 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 LRIG2O94898 1065 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 LSM8O95777 96 aaKnown RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 NME1P15531 152 aaKnown RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 JUNDP17535 347 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 CHRNB2P17787 502 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 TGM2P21980 687 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 ADRA1BP35368 520 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 SCNN1AP37088 669 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 POLR2FP61218 127 aaKnown RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 HNRNPKP61978 463 aaKnown RBP eCLIP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 CCDC14Q49A88 953 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 CDCP2Q5VXM1 449 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 KIAA1161Q6NSJ0 714 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 GUSBP11Q6P575 273 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 KYAT3Q6YP21 454 aaKnown RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZNF783Q6ZMS7 281 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 EFL1Q7Z2Z2 1120 aaKnown RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 BNIPLQ7Z465 357 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 VPS36Q86VN1 386 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 PARGQ86W56 976 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 CCDC185Q8N715 623 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 MSANTD4Q8NCY6 345 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 IFI44Q8TCB0 444 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 ARHGEF2Q92974 986 aaKnown RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 KLHL32Q96NJ5 620 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 DEPDC7Q96QD5 511 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 KLF6Q99612 283 aaPredicted RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 STK33Q9BYT3 514 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 VPS16Q9H269 839 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 NLRC4Q9NPP4 1024 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAM207AQ9NSI2 230 aaPredicted RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 PPARGC1AQ9UBK2 798 aaKnown RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 NOCTQ9UK39 431 aaKnown RBP8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 AHCTF1Q8WYP5 2266 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZNF462Q96JM2 2506 aa8.75□□□□□ -1.01
CTDNEP1-203ENST00000570385 A0A1W2PNU3 283 aaPredicted RBP8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 PMS2P1A4D2B8 440 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 H3BM21 787 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 MUSKO15146 869 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 EPHB6O15197 1021 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 AQP9O43315 295 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 BUB1O43683 1085 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 MMP20O60882 483 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 RAMP2O60895 175 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 GCATO75600 419 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 CSF2P04141 144 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 CYP1A1P04798 512 aaPredicted RBP8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 PLEKP08567 350 aaPredicted RBP8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 RHOQP17081 205 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 MMP8P22894 467 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 ERCC5P28715 1186 aaPredicted RBP8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 SDC4P31431 198 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 RABIFP47224 123 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 FMO1Q01740 532 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 CDR2Q01850 454 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 C19orf57Q0VDD7 668 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 EIF2B5Q13144 721 aaKnown RBP8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 POLD3Q15054 466 aaPredicted RBP8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 MYLK3Q32MK0 819 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 ARL13BQ3SXY8 428 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZNF805Q5CZA5 627 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 TCP11X2Q5H9J9 407 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 C3orf38Q5JPI3 329 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 MANEALQ5VSG8 457 aa8.74□□□□□ -1.01
CTDNEP1-203ENST00000570385 FOXR1Q6PIV2 292 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms