RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 IPO11Q9UI26 975 aaKnown RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 ZFC3H1O60293 1989 aaKnown RBP12.3□□□□□ -0.44
CAPN3-220ENST00000569827 SPTY2D1-AS1A0A0U1RR47 76 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 NEMP2A6NFY4 417 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 DRGXA6NNA5 263 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 FOXN3O00409 490 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-220ENST00000569827 GCATO75600 419 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 DXOO77932 396 aaKnown RBP12.29□□□□□ -0.44
CAPN3-220ENST00000569827 ITIH2P19823 946 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 ITGB7P26010 798 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 PON1P27169 355 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 L1CAMP32004 1257 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 KRT9P35527 623 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 PPP1R2P41236 205 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 RPS21P63220 83 aaKnown RBP12.29□□□□□ -0.44
CAPN3-220ENST00000569827 SRSF6Q13247 344 aaKnown RBP12.29□□□□□ -0.44
CAPN3-220ENST00000569827 EXOC3L4Q17RC7 722 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 ZSCAN23Q3MJ62 389 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 HSP90AA4PQ58FG1 418 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 ZCCHC8Q6NZY4 707 aaKnown RBP12.29□□□□□ -0.44
CAPN3-220ENST00000569827 GBP6Q6ZN66 633 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 ENOSF1Q7L5Y1 443 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 PHLDB2Q86SQ0 1253 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 VPS36Q86VN1 386 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 SLC35F3Q8IY50 421 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 LSM14AQ8ND56 463 aaKnown RBP12.29□□□□□ -0.44
CAPN3-220ENST00000569827 TTC9Q92623 222 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 PRR11Q96HE9 360 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-220ENST00000569827 PPP1R16AQ96I34 528 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 CFAP57Q96MR6 1250 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 HEPHQ9BQS7 1158 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 THSD1Q9NS62 852 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 HECAQ9UBI9 543 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-220ENST00000569827 ZNF212Q9UDV6 495 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 DNAJC12Q9UKB3 198 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 HS3ST3A1Q9Y663 406 aa12.29□□□□□ -0.44
CAPN3-220ENST00000569827 SDK2Q58EX2 2172 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 H3BM21 787 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 CD160O95971 181 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 CSF2P04141 144 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 UGT2B4P06133 528 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 GP1BAP07359 652 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 IGFALSP35858 605 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 DUSP3P51452 185 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-220ENST00000569827 CLCN6P51797 869 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 PDX1P52945 283 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 ERVPABLB-1P60509 514 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 RHDQ02161 417 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 PTK2Q05397 1052 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 VAC14Q08AM6 782 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 NR0B2Q15466 257 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 CDO1Q16878 200 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 CARD16Q5EG05 197 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 PRRT3Q5FWE3 981 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 BRMS1LQ5PSV4 323 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 ATXN7L2Q5T6C5 722 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-220ENST00000569827 KIAA1161Q6NSJ0 714 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 SETD3Q86TU7 594 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-220ENST00000569827 XYLT1Q86Y38 959 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 LSMEM2Q8N112 164 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 EMC1Q8N766 993 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 ZNF397Q8NF99 534 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-220ENST00000569827 FEM1CQ96JP0 617 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 IL12RB2Q99665 862 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 LRRC61Q9BV99 259 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 DUSP23Q9BVJ7 150 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 TRIM4Q9C037 500 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 SIRPGQ9P1W8 387 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 STAP1Q9ULZ2 295 aa12.28□□□□□ -0.44
CAPN3-220ENST00000569827 IGLV3-10A0A075B6K4 115 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 C16orf96A6NNT2 1141 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 KRIT1O00522 736 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 NEMP1O14524 444 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 FPGTO14772 594 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 TNFSF15O95150 251 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 GJB6O95452 261 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 RBMS1P29558 406 aaKnown RBP12.27□□□□□ -0.45
CAPN3-220ENST00000569827 MTIF2P46199 727 aaKnown RBP12.27□□□□□ -0.45
CAPN3-220ENST00000569827 RABIFP47224 123 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 ADKP55263 362 aaKnown RBP12.27□□□□□ -0.45
CAPN3-220ENST00000569827 ATP11AP98196 1134 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 GNA12Q03113 381 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 CCDC15Q0P6D6 951 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 SGCGQ13326 291 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 RAPGEF1Q13905 1077 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 FOXR2Q6PJQ5 311 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 RBM44Q6ZP01 1051 aaKnown RBP12.27□□□□□ -0.45
CAPN3-220ENST00000569827 B3GNT8Q7Z7M8 397 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 IRF2BP1Q8IU81 584 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 PHACTR4Q8IZ21 702 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 PCDH20Q8N6Y1 951 aaKnown RBP12.27□□□□□ -0.45
CAPN3-220ENST00000569827 NT5C3BQ969T7 300 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 VOPP1Q96AW1 172 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 IFT43Q96FT9 208 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 SLC46A1Q96NT5 459 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 CLPBQ9H078 707 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 PDCL3Q9H2J4 239 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 MBNL1Q9NR56 388 aaKnown RBP12.27□□□□□ -0.45
CAPN3-220ENST00000569827 APOBEC3BQ9UH17 382 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms