RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PRKAA2P54646 552 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 EMP3P54852 163 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 IL10RBQ08334 325 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 TAF10Q12962 218 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MSLNQ13421 630 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 LAMB3Q13751 1172 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 SLC14A2Q15849 920 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 UGP2Q16851 508 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 CTC1Q2NKJ3 1217 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 PARP15Q460N3 678 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 HSF5Q4G112 596 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 FASTKD1Q53R41 847 aaKnown RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 HSP90AA5PQ58FG0 334 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 N4BP2L1Q5TBK1 243 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 C1orf53Q5VUE5 145 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MBLAC2Q68D91 279 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 FSTL4Q6MZW2 842 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 FBXL22Q6P050 247 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 FUT10Q6P4F1 479 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 ARHGAP36Q6ZRI8 547 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 KIAA0408Q6ZU52 694 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 STRA8Q7Z7C7 330 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 CLNKQ7Z7G1 428 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 GALNT7Q86SF2 657 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MTDHQ86UE4 582 aaKnown RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 RASSF3Q86WH2 238 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 CRLF3Q8IUI8 442 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 GPR65Q8IYL9 337 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 TNS4Q8IZW8 715 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 DCLK2Q8N568 766 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 ZNF511Q8NB15 262 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 PDZD8Q8NEN9 1154 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 RFWD2Q8NHY2 731 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 RDH11Q8TC12 318 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 STON2Q8WXE9 905 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 PEX13Q92968 403 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 FBXO32Q969P5 355 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 SKA1Q96BD8 255 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 ZNF669Q96BR6 464 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 ARMC5Q96C12 935 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 KLHL29Q96CT2 875 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MFSD3Q96ES6 412 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 IMP4Q96G21 291 aaKnown RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 NSL1Q96IY1 281 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MRGPRX2Q96LB1 330 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MYRFLQ96LU7 910 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 PRKD2Q9BZL6 878 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 SAP130Q9H0E3 1048 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 RHOJQ9H4E5 214 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 FAM96AQ9H5X1 160 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 STN1Q9H668 368 aaKnown RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 ALG13Q9NP73 1137 aaKnown RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 CHRAC1Q9NRG0 131 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 TREX1Q9NSU2 369 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 C20orf96Q9NUD7 363 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 NDFIP2Q9NV92 336 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MPP6Q9NZW5 540 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 PCDH10Q9P2E7 1040 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 TXNDC16Q9P2K2 825 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MTRRQ9UBK8 725 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 HEY2Q9UBP5 337 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 RIMKLBQ9ULI2 386 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 TCAF1Q9Y4C2 921 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 PSAT1Q9Y617 370 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 TDRD15B5MCY1 1934 aaKnown RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PTPRDP23468 1912 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 SLC12A8A0AV02 714 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ZNF840PA6NDX5 716 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 MROH6A6NGR9 719 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CAPN14A8MX76 684 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TPP1O14773 563 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CHUKO15111 745 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PRAMEF11O60813 436 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CCDC22O60826 627 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 H2AFYO75367 372 aaKnown RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 WFS1O76024 890 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ABLIM3O94929 683 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 TBX18O95935 607 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 MT-CYBP00156 380 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 AHSGP02765 367 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 SERPINE1P05121 402 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 HLA-DQB2P05538 268 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 C2P06681 752 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 MMP2P08253 660 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 HSPA1AP0DMV8 641 aaKnown RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 HSPA1BP0DMV9 641 aaKnown RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 FGF3P11487 239 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 NEFHP12036 1026 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 MYL4P12829 197 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CPA3P15088 417 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 ALOX15P16050 662 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 IBSPP21815 317 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PSMA3P25788 255 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 GABRB3P28472 473 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 PTPN4P29074 926 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 CRABP2P29373 138 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 RFC2P35250 354 aa5.45□□□□□ -1.54
SF3B3-213ENST00000569687 MAPK8P45983 427 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms