RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 CLDN6P56747 220 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 SNRPD1P62314 119 aaKnown RBP15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 FGL2Q14314 439 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 POLD3Q15054 466 aaPredicted RBP15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 EFHC2Q5JST6 749 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 HES3Q5TGS1 186 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 DNAJC24Q6P3W2 148 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 SLFN11Q7Z7L1 901 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 ZSCAN30Q86W11 494 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 SLC22A18ASQ8N1D0 253 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 SLC25A45Q8N413 288 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 RYBPQ8N488 228 aaPredicted RBP15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 OR6K2Q8NGY2 324 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 FEM1CQ96JP0 617 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 SLC17A9Q9BYT1 436 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 GPR27Q9NS67 375 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 ZFYVE26Q68DK2 2539 aa15.31■□□□□ 0.04
SCAMP2-209ENST00000567638 ANKRD62A6NC57 917 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 ZSCAN5CA6NGD5 496 aaPredicted RBP15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 C16orf96A6NNT2 1141 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 KRIT1O00522 736 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 TRIM38O00635 465 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 SIGLEC6O43699 453 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 KDELR3O43731 214 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 PIAS2O75928 621 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 JUPP14923 745 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 ACP1P24666 158 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 GKP32189 559 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 ABL2P42684 1182 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 ZNF143P52747 638 aaPredicted RBP15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 ZNF211Q13398 564 aaPredicted RBP15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 ZNF805Q5CZA5 627 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 PPP1R15BQ5SWA1 713 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 CCDC183Q5T5S1 534 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 C19orf48Q6RUI8 117 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 KYAT3Q6YP21 454 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 LEKR1Q6ZMV7 388 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 Q6ZSR6 202 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 PTAR1Q7Z6K3 402 aaPredicted RBP15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 DCP2Q8IU60 420 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 PYROXD2Q8N2H3 581 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 AOPEPQ8N6M6 819 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 RTL3Q8N8U3 475 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 OR4C6Q8NH72 309 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 RAB7BQ96AH8 199 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 VOPP1Q96AW1 172 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 NXPE2Q96DL1 559 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 IFT43Q96FT9 208 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 MCEEQ96PE7 176 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 OSBPL1AQ9BXW6 950 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 NOL6Q9H6R4 1146 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 UCKL1Q9NWZ5 548 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 HS3ST3A1Q9Y663 406 aa15.3■□□□□ 0.04
SCAMP2-209ENST00000567638 CACNA1GO43497 2377 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 URB1O60287 2271 aaKnown RBP15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 POM121BA6NF01 834 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 RAD51BO15315 384 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 TSPAN6O43657 245 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 POP4O95707 220 aaKnown RBP15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 MBD3O95983 291 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 PAK4O96013 591 aaPredicted RBP15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 UGT2B4P06133 528 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 ATP1A3P13637 1013 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 FERP16591 822 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 EPHB2P29323 1055 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 AIF1P55008 147 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 RPL7AP62424 266 aaKnown RBP15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 TARDBPQ13148 414 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 COL28A1Q2UY09 1125 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 HS1BP3Q53T59 392 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 SCYL2Q6P3W7 929 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 ZNF354CQ86Y25 554 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 RFFLQ8WZ73 363 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 BMFQ96LC9 184 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 CNPY3Q9BT09 278 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 C1QTNF2Q9BXJ5 285 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 SCUBE2Q9NQ36 999 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 FZD10Q9ULW2 581 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 ITM2BQ9Y287 266 aa15.29■□□□□ 0.04
SCAMP2-209ENST00000567638 LRP4O75096 1905 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 NEMP1O14524 444 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 FFAR2O15552 330 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 SPINT1O43278 529 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 BUB1O43683 1085 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 TMCC1O94876 653 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 CCDC172P0C7W6 258 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 GIMD1P0DJR0 217 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 YBEYP58557 167 aaPredicted RBP15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 DAB2P98082 770 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 TYRO3Q06418 890 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 MYLK3Q32MK0 819 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 ATXN7L2Q5T6C5 722 aaPredicted RBP15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 ACAD10Q6JQN1 1059 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 MCOLN2Q8IZK6 566 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 CASKIN2Q8WXE0 1202 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 BAP1Q92560 729 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 ARHGEF26Q96DR7 871 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 GDAP1L1Q96MZ0 367 aa15.28■□□□□ 0.04
SCAMP2-209ENST00000567638 KLHL32Q96NJ5 620 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms