RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 GSTA3Q16772 222 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 TEDDM1Q5T9Z0 273 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 THEMIS2Q5TEJ8 643 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 KYAT3Q6YP21 454 aaKnown RBP23.59■■□□□ 1.37
LINC00543-201ENST00000567234 OTOAQ7RTW8 1153 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 TFAP2DQ7Z6R9 452 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 FAM13CQ8NE31 585 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 RAB3IL1Q8TBN0 382 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 ISL2Q96A47 359 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 FAM136AQ96C01 138 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 IFT43Q96FT9 208 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 ZNF558Q96NG5 402 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 MRM3Q9HC36 420 aaKnown RBP23.59■■□□□ 1.37
LINC00543-201ENST00000567234 PCMTD2Q9NV79 361 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 NSMCE4AQ9NXX6 385 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 SCOCQ9UIL1 159 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 PSAT1Q9Y617 370 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 WDR91A4D1P6 747 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 MT-CYBP00156 380 aaPredicted RBP23.59■■□□□ 1.37
LINC00543-201ENST00000567234 SPRP35270 261 aaPredicted RBP23.59■■□□□ 1.37
LINC00543-201ENST00000567234 SF3A3Q12874 501 aaKnown RBP eCLIP23.59■■□□□ 1.37
LINC00543-201ENST00000567234 FYB2Q5VWT5 728 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 TEX26Q8N6G2 289 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 ATP2A3Q93084 1043 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 MFSD3Q96ES6 412 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 MYRFLQ96LU7 910 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 RPRD1AQ96P16 312 aaPredicted RBP23.59■■□□□ 1.37
LINC00543-201ENST00000567234 SLC13A1Q9BZW2 595 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 VPS45Q9NRW7 570 aa23.59■■□□□ 1.37
LINC00543-201ENST00000567234 BIRC5O15392 142 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 ALDOAP04075 364 aaKnown RBP23.58■■□□□ 1.37
LINC00543-201ENST00000567234 HMBSP08397 361 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 RPL17P18621 184 aaKnown RBP23.58■■□□□ 1.37
LINC00543-201ENST00000567234 CSE1LP55060 971 aaKnown RBP23.58■■□□□ 1.37
LINC00543-201ENST00000567234 INSCQ1MX18 579 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 DENND5AQ6IQ26 1287 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 PKN3Q6P5Z2 889 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 RANBP10Q6VN20 620 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 SLC39A11Q8N1S5 342 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 IPMKQ8NFU5 416 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 RBBP8Q99708 897 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 FAM167BQ9BTA0 163 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 HERC2P3Q9BVR0 1158 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 CHRAC1Q9NRG0 131 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 PDP2Q9P2J9 529 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 DCDC2Q9UHG0 476 aa23.58■■□□□ 1.37
LINC00543-201ENST00000567234 RAMP2O60895 175 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 GLRA3O75311 464 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 TPH1P17752 444 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 TACR2P21452 398 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 PTPN4P29074 926 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 PDE1BQ01064 536 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 IL10RBQ08334 325 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 MARC1Q5VT66 337 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 PDPK2PQ6A1A2 396 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 NADSYN1Q6IA69 706 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 KCNMB4Q86W47 210 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 AZIN2Q96A70 460 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 TMEM169Q96HH4 297 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 FICDQ9BVA6 458 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 MYLK2Q9H1R3 596 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 SP110Q9HB58 689 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 RC3H2Q9HBD1 1191 aaKnown RBP23.57■■□□□ 1.36
LINC00543-201ENST00000567234 ARNT2Q9HBZ2 717 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 SLC17A6Q9P2U8 582 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 PTPRSQ13332 1948 aa23.57■■□□□ 1.36
LINC00543-201ENST00000567234 ZNF840PA6NDX5 716 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 EFCAB14O75071 495 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 TGDSO95455 350 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 TROVE2P10155 538 aaKnown RBP eCLIP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 HMGA1P17096 107 aaKnown RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 SP100P23497 879 aaPredicted RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 MAGEA12P43365 314 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 LIMK2P53671 638 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 POLD3Q15054 466 aaPredicted RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 SPOUT1Q5T280 376 aaKnown RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 HECTD3Q5T447 861 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 PTPRN2Q92932 1015 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 IMP4Q96G21 291 aaKnown RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 TRMT2BQ96GJ1 504 aaKnown RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 MRGPRX2Q96LB1 330 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 ZNF512Q96ME7 567 aaPredicted RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 TSSK1BQ9BXA7 367 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 FSD1LQ9BXM9 530 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 SIRPGQ9P1W8 387 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 NKX1-2Q9UD57 310 aaPredicted RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 F5H5T6 163 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 TPP1O14773 563 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 NVLO15381 856 aaKnown RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 ACSL4O60488 711 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 SEC24AO95486 1093 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 HADHAP40939 763 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 PTDSS1P48651 473 aaKnown RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 DEFB103AP81534 67 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 SERINC3Q13530 473 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 KDELC1Q6UW63 502 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 STRA8Q7Z7C7 330 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 CMTR2Q8IYT2 770 aaKnown RBP23.56■■□□□ 1.36
LINC00543-201ENST00000567234 C7orf61Q8IZ16 206 aa23.56■■□□□ 1.36
LINC00543-201ENST00000567234 TMEM199Q8N511 208 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms