RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 KRT74Q7RTS7 529 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 AMIGO2Q86SJ2 522 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 CHSY1Q86X52 802 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.31□□□□□ -1.56
CNOT1-209ENST00000566240 FAM9BQ8IZU0 186 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 AMER2Q8N7J2 671 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 PSPC1Q8WXF1 523 aaKnown RBP5.31□□□□□ -1.56
CNOT1-209ENST00000566240 GTF3C6Q969F1 213 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 JAKMIP2Q96AA8 810 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 AP1M1Q9BXS5 423 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 HIPK3Q9H422 1215 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 ZNF304Q9HCX3 659 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 SERGEFQ9UGK8 458 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 HAO1Q9UJM8 370 aa5.31□□□□□ -1.56
CNOT1-209ENST00000566240 CYP2D7A0A087X1C5 515 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-209ENST00000566240 IFNL4K9M1U5 179 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 TAF4O00268 1085 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 NR2F1P10589 423 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 CYP2A6P11509 494 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-209ENST00000566240 MCM3P25205 808 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 KLRC2P26717 231 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 NNMTP40261 264 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 EIF2DP41214 584 aaKnown RBP5.3□□□□□ -1.56
CNOT1-209ENST00000566240 UBA7P41226 1012 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 GABRB2P47870 512 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 CDH8P55286 799 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 CALD1Q05682 793 aaKnown RBP5.3□□□□□ -1.56
CNOT1-209ENST00000566240 NIPAL4Q0D2K0 466 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 CSTF3Q12996 717 aaKnown RBP5.3□□□□□ -1.56
CNOT1-209ENST00000566240 IRF3Q14653 427 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 RNPS1Q15287 305 aaKnown RBP5.3□□□□□ -1.56
CNOT1-209ENST00000566240 HIST2H2ACQ16777 129 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-209ENST00000566240 ARMC3Q5W041 872 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 TBC1D9BQ66K14 1250 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 SLC30A6Q6NXT4 461 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 CPLX2Q6PUV4 134 aaKnown RBP5.3□□□□□ -1.56
CNOT1-209ENST00000566240 TSSK4Q6SA08 328 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 GSTA5Q7RTV2 222 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 WDR5BQ86VZ2 330 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 HDAC7Q8WUI4 952 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 TMEM170AQ8WVE7 144 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 LARP4BQ92615 738 aaKnown RBP5.3□□□□□ -1.56
CNOT1-209ENST00000566240 KAT2AQ92830 837 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 TXLNGYQ9BZA5 131 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 ASB6Q9NWX5 421 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 CTNNAL1Q9UBT7 734 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 KAT6AQ92794 2004 aa5.3□□□□□ -1.56
CNOT1-209ENST00000566240 A0A1W2PRG0 241 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 SLC22A23A1A5C7 686 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 TMEM191CA6NGB0 347 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 BTBD18B2RXH4 712 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 FAM157AC9JC47 383 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 USP17L23D6RBM5 183 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 INPPL1O15357 1258 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 DKC1O60832 514 aaKnown RBP eCLIP5.29□□□□□ -1.56
CNOT1-209ENST00000566240 CLTBP09497 229 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 NHLRC4P0CG21 123 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-209ENST00000566240 TNFRSF1AP19438 455 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 TFEBP19484 476 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 EDN2P20800 178 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 IL11P20809 199 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 GPD1P21695 349 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 PIP4K2AP48426 406 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-209ENST00000566240 YPEL5P62699 121 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 PPP2R5BQ15173 497 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 RAB41Q5JT25 222 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 SPECC1Q5M775 1068 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 GKAP1Q5VSY0 366 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-209ENST00000566240 Q6ZPA2 131 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 CYB5R4Q7L1T6 521 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 ZNF627Q7L945 461 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 PRPF39Q86UA1 669 aaKnown RBP5.29□□□□□ -1.56
CNOT1-209ENST00000566240 CCDC25Q86WR0 208 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 PNLDC1Q8NA58 520 aaKnown RBP5.29□□□□□ -1.56
CNOT1-209ENST00000566240 CCDC191Q8NCU4 936 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 ZNF398Q8TD17 642 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 MMABQ96EY8 250 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-209ENST00000566240 ZNF747Q9BV97 191 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 IKZF4Q9H2S9 585 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 PDE7BQ9NP56 450 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 RRP7BPQ9NSQ0 103 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 SPATS2LQ9NUQ6 558 aaKnown RBP5.29□□□□□ -1.56
CNOT1-209ENST00000566240 SUCLA2Q9P2R7 463 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-209ENST00000566240 PACSIN3Q9UKS6 424 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 WNT6Q9Y6F9 365 aa5.29□□□□□ -1.56
CNOT1-209ENST00000566240 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.28□□□□□ -1.56
CNOT1-209ENST00000566240 CBY3A6NI87 242 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 A8MZ25 164 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 CCER2I3L3R5 266 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 KIF1CO43896 1103 aaKnown RBP5.28□□□□□ -1.56
CNOT1-209ENST00000566240 NEURL1O76050 574 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 RNF8O76064 485 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 IPO7O95373 1038 aaKnown RBP5.28□□□□□ -1.56
CNOT1-209ENST00000566240 ADRB1P08588 477 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 PTPN2P17706 415 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 YWHAQP27348 245 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 MCM7P33993 719 aa5.28□□□□□ -1.56
CNOT1-209ENST00000566240 DPP6P42658 865 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms