RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 AURKCQ9UQB9 309 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 PCDHGA7Q9Y5G6 932 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 OTOFQ9HC10 1997 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.49■□□□□ 0.23
LINC00554-201ENST00000564841 TOR1BO14657 336 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 BAIAP3O94812 1187 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 CLDN10P78369 228 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 GALNT2Q10471 571 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 ARL13AQ5H913 290 aaPredicted RBP16.49■□□□□ 0.23
LINC00554-201ENST00000564841 SIX6OS1Q8N1H7 587 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 CLIP3Q96DZ5 547 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 EHD1Q9H4M9 534 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 CROTQ9UKG9 612 aa16.49■□□□□ 0.23
LINC00554-201ENST00000564841 CNOT11Q9UKZ1 510 aaKnown RBP16.49■□□□□ 0.23
LINC00554-201ENST00000564841 GOLGA8TH3BQL2 631 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 VTNP04004 478 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 TFEBP19484 476 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 MX2P20592 715 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 NUMBP49757 651 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 KCNC4Q03721 635 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 EEF1DP3Q658K8 133 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 DSG4Q86SJ6 1040 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 XYLT1Q86Y38 959 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 PCDH19Q8TAB3 1148 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 ZC3H15Q8WU90 426 aaKnown RBP16.48■□□□□ 0.23
LINC00554-201ENST00000564841 SGCDQ92629 289 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 AGAP2Q99490 1192 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 FRMD8P1Q9BZ68 369 aaPredicted RBP16.48■□□□□ 0.23
LINC00554-201ENST00000564841 POLE4Q9NR33 117 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 IQCA1LA6NCM1 817 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 TRIM38O00635 465 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 MT-CO1P00395 513 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 CXCL8P10145 99 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 CYP2C9P11712 490 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 MAGEA3P43357 314 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 RPS3AP61247 264 aaKnown RBP16.48■□□□□ 0.23
LINC00554-201ENST00000564841 RHDQ02161 417 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 DPYSQ14117 519 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 TTLL4Q14679 1199 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 SPATA6LQ8N4H0 392 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 TMCO5AQ8N6Q1 288 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 BRI3BPQ8WY22 251 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 LPIN3Q9BQK8 851 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 A0A1W2PQ67 120 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 IL18RAPO95256 599 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 TGFB3P10600 412 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 JAK1P23458 1154 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 TBXAS1P24557 533 aaPredicted RBP16.48■□□□□ 0.23
LINC00554-201ENST00000564841 PTPN9P43378 593 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 NAGLUP54802 743 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 PHKG1Q16816 387 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 GLRA4Q5JXX5 417 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 FAM102AQ5T9C2 384 aaPredicted RBP16.48■□□□□ 0.23
LINC00554-201ENST00000564841 SEL1L3Q68CR1 1132 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 PRR23BQ6ZRT6 265 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 NSMCE3Q96MG7 304 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 TRIM8Q9BZR9 551 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 ILKAPQ9H0C8 392 aaPredicted RBP16.48■□□□□ 0.23
LINC00554-201ENST00000564841 MINDY3Q9H8M7 445 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 BCAP29Q9UHQ4 241 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 AKT3Q9Y243 479 aa16.48■□□□□ 0.23
LINC00554-201ENST00000564841 BPTFQ12830 3046 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 CCDC78A2IDD5 438 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 PRKCBP05771 671 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 OPRL1P41146 370 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 NIPAL4Q0D2K0 466 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 EPHX4Q8IUS5 362 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 PCYOX1LQ8NBM8 494 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 ASB9Q96DX5 294 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 CSF3RQ99062 836 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 ADI1Q9BV57 179 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 NIFKQ9BYG3 293 aaKnown RBP16.47■□□□□ 0.23
LINC00554-201ENST00000564841 ZBTB26Q9HCK0 441 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 CPA4Q9UI42 421 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 LOXHD1Q8IVV2 1947 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 WDR90Q96KV7 1748 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 HDAC3O15379 428 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 MAFO75444 373 aaPredicted RBP16.47■□□□□ 0.23
LINC00554-201ENST00000564841 ASS1P00966 412 aaKnown RBP16.47■□□□□ 0.23
LINC00554-201ENST00000564841 DCKP27707 260 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 LRRC8EQ6NSJ5 796 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 VASH1Q7L8A9 365 aaPredicted RBP16.47■□□□□ 0.23
LINC00554-201ENST00000564841 APBB2Q92870 758 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 FAM96AQ9H5X1 160 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 RIC8BQ9NVN3 520 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 CPQQ9Y646 472 aa16.47■□□□□ 0.23
LINC00554-201ENST00000564841 IGKV6D-21A0A0A0MT36 114 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 MT-ND1P03886 318 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 C8BP07358 591 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 INSRRP14616 1297 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 IFITM3Q01628 133 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 TAP1Q03518 808 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 BFSP2Q13515 415 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 TARBP2Q15633 366 aaKnown RBP16.46■□□□□ 0.23
LINC00554-201ENST00000564841 ZNF618Q5T7W0 954 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 NEPROQ6NW34 567 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 MROH8Q9H579 483 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 NANOGQ9H9S0 305 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 IL1RL2Q9HB29 575 aa16.46■□□□□ 0.23
LINC00554-201ENST00000564841 NGRNQ9NPE2 291 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms