RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SHBQ15464 509 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 PFKFB3Q16875 520 aaPredicted RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 EDRF1Q3B7T1 1238 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 LSM12Q3MHD2 195 aaKnown RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 FAM153CQ494X1 144 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 C5orf22Q49AR2 442 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 AWAT1Q58HT5 328 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 FAM171A1Q5VUB5 890 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 RBM44Q6ZP01 1051 aaKnown RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 C17orf53Q8N3J3 647 aaPredicted RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 DNAAF1Q8NEP3 725 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 OR4N2Q8NGD1 307 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 FAR1Q8WVX9 515 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 CCDC34Q96HJ3 373 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 DLGAP2Q9P1A6 1054 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 HAO1Q9UJM8 370 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 ADAM21Q9UKJ8 722 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 TNFSF13BQ9Y275 285 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 ZNF711Q9Y462 761 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 TTC36A6NLP5 189 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 EBAG9O00559 213 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 ENTPD3O75355 529 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 GCATO75600 419 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 NEURL1O76050 574 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 TFP02787 698 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 WNT1P04628 370 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 RPN1P04843 607 aaKnown RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 IRF1P10914 325 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 PTGER1P34995 402 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 EIF2DP41214 584 aaKnown RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 PIP4K2AP48426 406 aaPredicted RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 CYP2J2P51589 502 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 SIM1P81133 766 aaPredicted RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 CALD1Q05682 793 aaKnown RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 RASA2Q15283 850 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 HECTD2Q5U5R9 776 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 TMEM268Q5VZI3 342 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 GPR139Q6DWJ6 353 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 JADE1Q6IE81 842 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 Q6ZPA2 131 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 GPAT4Q86UL3 456 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 ARL14EPQ8N8R7 260 aaPredicted RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 BCAS4Q8TDM0 211 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 GTF3C6Q969F1 213 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 CAVIN3Q969G5 261 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 SLC22A18Q96BI1 424 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 RITA1Q96K30 269 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 C1orf74Q96LT6 269 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 H2AFJQ9BTM1 129 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 ARL8BQ9NVJ2 186 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 SERGEFQ9UGK8 458 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 MTMR6Q9Y217 621 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 PCDHGB5Q9Y5G0 923 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 BTBD18B2RXH4 712 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 EIF3CLB5ME19 914 aaKnown RBP2.71□□□□□ -1.97
CHD9-209ENST00000564255 TP73O15350 636 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 CBX6O95503 412 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 LCKP06239 509 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 TNFRSF1AP19438 455 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 MCM3P25205 808 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 HOXA7P31268 230 aaPredicted RBP2.71□□□□□ -1.97
CHD9-209ENST00000564255 HOXA13P31271 388 aaPredicted RBP2.71□□□□□ -1.97
CHD9-209ENST00000564255 ARSFP54793 590 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 CDH8P55286 799 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 GOLGA8DPQ0D2H9 430 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 NTRK2Q16620 822 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 HIST2H2ACQ16777 129 aaPredicted RBP2.71□□□□□ -1.97
CHD9-209ENST00000564255 ALG11Q2TAA5 492 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 GARNL3Q5VVW2 1013 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 SERPINA13PQ6UXR4 307 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 TRIM74Q86UV6 250 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 TRIM73Q86UV7 250 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 TICAM1Q8IUC6 712 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 AMER2Q8N7J2 671 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 CAGE1Q8TC20 777 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 GDPD5Q8WTR4 605 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 RADILQ96JH8 1075 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 UROC1Q96N76 676 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 TM2D2Q9BX73 214 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 OR10A4Q9H209 315 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 CYP4F11Q9HBI6 524 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 SEC63Q9UGP8 760 aaKnown RBP2.71□□□□□ -1.97
CHD9-209ENST00000564255 FBXO4Q9UKT5 387 aa2.71□□□□□ -1.97
CHD9-209ENST00000564255 UTYO14607 1347 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 MGST3O14880 152 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 HCRTR2O43614 444 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 IL1AP01583 271 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 CLTBP09497 229 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 ST6GAL1P15907 406 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 GCH1P30793 250 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 RYKP34925 604 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 DPP6P42658 865 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 GNAQP50148 359 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 KRT83P78385 493 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 SLC18A2Q05940 514 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 MTA1Q13330 715 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 FRG1Q14331 258 aaKnown RBP2.71□□□□□ -1.98
CHD9-209ENST00000564255 PSMD6Q15008 389 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 PGM5Q15124 567 aa2.71□□□□□ -1.98
CHD9-209ENST00000564255 PROSER3Q2NL68 480 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms