RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 GUCY1B2O75343 617 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 TULP3O75386 442 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 DDX58O95786 925 aaKnown RBP3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 DDAH2O95865 285 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 F9P00740 461 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 CIITAP33076 1130 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 SLC16A2P36021 539 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 GPD2P43304 727 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 CDH15P55291 814 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 ARF3P61204 181 aaPredicted RBP3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 ARF1P84077 181 aaKnown RBP3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 PMPCAQ10713 525 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 PKP1Q13835 747 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 IL13RA2Q14627 380 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 CCNG2Q16589 344 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 MEA1Q16626 185 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 SMTNL2Q2TAL5 461 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 AP5B1Q2VPB7 878 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 ZNF260Q3ZCT1 412 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 NAPEPLDQ6IQ20 393 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 AAGABQ6PD74 315 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 CCDC129Q6ZRS4 1044 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 NEK10Q6ZWH5 1172 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 ENOSF1Q7L5Y1 443 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 MRPL10Q7Z7H8 261 aaKnown RBP3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 IGFN1Q86VF2 1251 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 MON1AQ86VX9 555 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 DIS3L2Q8IYB7 885 aaKnown RBP3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 OR8H2Q8N162 312 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 RFWD2Q8NHY2 731 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 METTL6Q8TCB7 284 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 FAR1Q8WVX9 515 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 RAB40AQ8WXH6 277 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 EME1Q96AY2 570 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 IFT27Q9BW83 186 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 HEMGNQ9BXL5 484 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 INTS2Q9H0H0 1204 aaKnown RBP3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 LMAN2LQ9H0V9 348 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 HIPK3Q9H422 1215 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 PRKRIP1Q9H875 184 aaPredicted RBP3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 BRF2Q9HAW0 419 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 TRNAU1APQ9NX07 287 aaKnown RBP3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 GRHL1Q9NZI5 618 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 MSRB1Q9NZV6 116 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 ICKQ9UPZ9 632 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 PIAS3Q9Y6X2 628 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 SYNDIG1LA6NDD5 238 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 OR6C68A6NDL8 312 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 SOCS2O14508 198 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 GJB3O75712 270 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 CHRM4P08173 479 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 SPARCP09486 303 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 UBL4AP11441 157 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 PRF1P14222 555 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 KLRC2P26717 231 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 NAP1L1P55209 391 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 RPS3AP61247 264 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 RBMS2Q15434 407 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 TWIST1Q15672 202 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 RPE65Q16518 533 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 SLC18A3Q16572 532 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 BAK1Q16611 211 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 ALG10Q5BKT4 473 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 ALG10BQ5I7T1 473 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 ENTPD8Q5MY95 495 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 C6orf10Q5SRN2 563 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 CFAP58Q5T655 872 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 MFSD4BQ5TF39 518 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 SNX30Q5VWJ9 437 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 SPATA1Q5VX52 437 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 TBC1D9BQ66K14 1250 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 ZNF280DQ6N043 979 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 SHC4Q6S5L8 630 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 TMCO3Q6UWJ1 677 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 TMTC3Q6ZXV5 915 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 CCDC25Q86WR0 208 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 SLC25A41Q8N5S1 370 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 ARFGAP1Q8N6T3 406 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 FUZQ9BT04 418 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 ITPAQ9BY32 194 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 GHITMQ9H3K2 345 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 EPHX3Q9H6B9 360 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 EIF2B3Q9NR50 452 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 SEPT11Q9NVA2 429 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 HEY2Q9UBP5 337 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 VPS28Q9UK41 221 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 PCDHGB4Q9UN71 923 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 PCDHA12Q9UN75 941 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 DHDHQ9UQ10 334 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 PSAT1Q9Y617 370 aa3.47□□□□□ -1.85
SHCBP1-202ENST00000563219 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 LY6G6EA0A0G2JKS1 128 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 GAGE12JA6NER3 117 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 GAGE10A6NGK3 116 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 MYMKA6NI61 221 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TSPY2A6NKD2 308 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 IFNL4K9M1U5 179 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 PER2O15055 1255 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms