RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 NPWQ8N729 165 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 APPL2Q8NEU8 664 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 USP33Q8TEY7 942 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 IRGQQ8WZA9 623 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 MAML3Q96JK9 1138 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 EIF2AQ9BY44 585 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 DNAI2Q9GZS0 605 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 POMKQ9H5K3 350 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 NOL11Q9H8H0 719 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 TRHDEQ9UKU6 1024 aa14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 FAF1Q9UNN5 650 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 HEMK1Q9Y5R4 338 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-202ENST00000561976 NCAM2O15394 837 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 GPC4O75487 556 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 C8BP07358 591 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 COL6A2P12110 1019 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 FASTKQ14296 549 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 CEP97Q8IW35 865 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 LINC01465Q8N7H1 131 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 MIPOL1Q8TD10 442 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 SLC29A1Q99808 456 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 EFHD1Q9BUP0 239 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 PNPLA3Q9NST1 481 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 FAM95CA0A1B0GW59 222 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 TTC36A6NLP5 189 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 TARM1B6A8C7 271 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 H0YJX3 145 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 H3BNH8 94 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 SPTLC1O15269 473 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 MTSS1O43312 755 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 STAMBPO95630 424 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 HSPA1AP0DMV8 641 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 HSPA1BP0DMV9 641 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 ARSAP15289 507 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 AKAP5P24588 427 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 GABRB3P28472 473 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 CDK9P50750 372 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 PRAMEP78395 509 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 MAPRE2Q15555 327 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 UGP2Q16851 508 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 REP15Q6BDI9 236 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 ZBTB49Q6ZSB9 765 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 TRIM67Q6ZTA4 783 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 CATSPER4Q7RTX7 472 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 SNX31Q8N9S9 440 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 ELMO2Q96JJ3 720 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 TNIP3Q96KP6 325 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 MRPL46Q9H2W6 279 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 CYP4F12Q9HCS2 524 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 ANLNQ9NQW6 1124 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 CACNA2D2Q9NY47 1150 aa14.13□□□□□ -0.15
VPS9D1-202ENST00000561976 NEMP2A6NFY4 417 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 PSMD12O00232 456 aaPredicted RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 UBDO15205 165 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 BEST1O76090 585 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 PGK1P00558 417 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 EMP3P54852 163 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 SLC12A2P55011 1212 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 CDH15P55291 814 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 POU6F1Q14863 301 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 ZBTB6Q15916 424 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 TSTD2Q5T7W7 516 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 CNSTQ6PJW8 725 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 CARM1Q86X55 608 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 TXNDC5Q8NBS9 432 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 RNF169Q8NCN4 708 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 SNRNP27Q8WVK2 155 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 STON2Q8WXE9 905 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 GFM2Q969S9 779 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 PBXIP1Q96AQ6 731 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 MED10Q9BTT4 135 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 FTHL17Q9BXU8 183 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 SPAG4Q9NPE6 437 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 KLK14Q9P0G3 267 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 PRORSD1PA6NEY8 169 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 NPHS1O60500 1241 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 ZNF189O75820 626 aaPredicted RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 SLC25A27O95847 323 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 CKMT2P17540 419 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 EPHX2P34913 555 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 MAP7D1Q3KQU3 841 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 DALRD3Q5D0E6 543 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 ZNF772Q68DY9 489 aaPredicted RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 OTOP3Q7RTS5 596 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 PIWIL4Q7Z3Z4 852 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 RNF135Q8IUD6 432 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 TRPM4Q8TD43 1214 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 DIS3LQ8TF46 1054 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 NT5C3BQ969T7 300 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 MAELQ96JY0 434 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 DUSP16Q9BY84 665 aa14.12□□□□□ -0.15
VPS9D1-202ENST00000561976 NFKBIEO00221 500 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 MAGEB3O15480 346 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 AKAP10O43572 662 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 HUS1O60921 280 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 USP2O75604 605 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 TIPRLO75663 272 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 RECQL4O94761 1208 aa14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 HNRNPCP07910 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
VPS9D1-202ENST00000561976 SLC7A1P30825 629 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms