RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 CD4P01730 458 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 PYGLP06737 847 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 TBC1D3HP0C7X1 549 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 RXRAP19793 462 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 GPD1P21695 349 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 DRD4P21917 467 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 RARRES1P49788 294 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 JAK3P52333 1124 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 RBM5P52756 815 aaKnown RBP eCLIP4.39□□□□□ -1.71
LRRC28-222ENST00000561431 UBASH3AP57075 661 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 UBXN2AP68543 259 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 PSG6Q00889 435 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 LMAN2Q12907 356 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 CUL4BQ13620 913 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 GCKRQ14397 625 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 KCNJ12Q14500 433 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 PLCB4Q15147 1175 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 ARMC4Q5T2S8 1044 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 HECTD3Q5T447 861 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 BEND3Q5T5X7 828 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 TBC1D3GQ6DHY5 549 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 TANGO2Q6ICL3 276 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 TBC1D3CQ6IPX1 549 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 MSANTD2Q6P1R3 559 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 CEP85Q6P2H3 762 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 TMEM65Q6PI78 240 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 CYP26C1Q6V0L0 522 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 SYNE3Q6ZMZ3 975 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 RTL10Q7L3V2 364 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 SDCCAG8Q86SQ7 713 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-222ENST00000561431 TBC1D3Q8IZP1 549 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-222ENST00000561431 C12orf76Q8N812 135 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-222ENST00000561431 TERB1Q8NA31 727 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 LINS1Q8NG48 757 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 OR6Y1Q8NGX8 325 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 CSGALNACT1Q8TDX6 532 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 DNAAF4Q8WXU2 420 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 TBC1D5Q92609 795 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 PDLIM2Q96JY6 352 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 CCDC17Q96LX7 622 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 MMS19Q96T76 1030 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 NUDT16L1Q9BRJ7 211 aaKnown RBP4.39□□□□□ -1.71
LRRC28-222ENST00000561431 ADGRE3Q9BY15 652 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 DIAPH3Q9NSV4 1193 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 ATP8A2Q9NTI2 1148 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 LIN7CQ9NUP9 197 aaKnown RBP4.39□□□□□ -1.71
LRRC28-222ENST00000561431 RBM28Q9NW13 759 aaKnown RBP4.39□□□□□ -1.71
LRRC28-222ENST00000561431 ASB6Q9NWX5 421 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 NDUFAF4Q9P032 175 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 FOXJ2Q9P0K8 574 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 GIMAP2Q9UG22 337 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 RAB21Q9UL25 225 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 CNTN6Q9UQ52 1028 aa4.39□□□□□ -1.71
LRRC28-222ENST00000561431 RRP15Q9Y3B9 282 aaKnown RBP4.39□□□□□ -1.71
LRRC28-222ENST00000561431 CACNA1FO60840 1977 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 PSME4Q14997 1843 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 CCDC187A0A096LP49 1063 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 YDJCA8MPS7 323 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 FAM25EA8MYX2 175 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 E7EVH7 732 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 SMIM22K7EJ46 135 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 MASP2O00187 686 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 EIF3FO00303 357 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-222ENST00000561431 NCAM2O15394 837 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 PPIP5K2O43314 1243 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 CBFA2T3O75081 653 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 TJP3O95049 919 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 C1RP00736 705 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 ELFN1P0C7U0 828 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 VEGFAP15692 232 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-222ENST00000561431 CST5P28325 142 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-222ENST00000561431 PCSK6P29122 969 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 SERPINA4P29622 427 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 KRT20P35900 424 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 PRKAA2P54646 552 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 NAP1L1P55209 391 aaKnown RBP4.38□□□□□ -1.71
LRRC28-222ENST00000561431 RPS8P62241 208 aaKnown RBP4.38□□□□□ -1.71
LRRC28-222ENST00000561431 CYP4F2P78329 520 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 HOXA4Q00056 320 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-222ENST00000561431 PPP2R5CQ13362 524 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 PSMD6Q15008 389 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 CCNG2Q16589 344 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 CCDC152Q4G0S7 254 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 EPHA10Q5JZY3 1008 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 FAM90A2PQ658T7 463 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 ISM2Q6H9L7 571 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 TRIM72Q6ZMU5 477 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 CATSPER4Q7RTX7 472 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 AMIGO2Q86SJ2 522 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 MOGAT3Q86VF5 341 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 GPC2Q8N158 579 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.38□□□□□ -1.71
LRRC28-222ENST00000561431 ADAMTS18Q8TE60 1221 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 SNX21Q969T3 373 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 CTHRC1Q96CG8 243 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 MCRS1Q96EZ8 462 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 PRR11Q96HE9 360 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-222ENST00000561431 SLX1AQ9BQ83 275 aa4.38□□□□□ -1.71
LRRC28-222ENST00000561431 TRIM6Q9C030 488 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-222ENST00000561431 VPS33BQ9H267 617 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms