RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	DDX58	O95786	925 aa	Known RBP	5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	CENPB	P07199	599 aa	Predicted RBP	5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	FMO4	P31512	558 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	SLC16A2	P36021	539 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	CASP2	P42575	452 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	CTCF	P49711	727 aa	Predicted RBP	5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	TMPRSS3	P57727	454 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	ID2	Q02363	134 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	CYP4A11	Q02928	519 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	SRSF4	Q08170	494 aa	Known RBP	5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	ERV3-1	Q14264	604 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	SMTNL2	Q2TAL5	461 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	KIAA1614	Q5VZ46	1190 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	TADA2B	Q86TJ2	420 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	GPAT4	Q86UL3	456 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	SLC25A41	Q8N5S1	370 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	LRRC57	Q8N9N7	239 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	PIP5K1A	Q99755	562 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	PRSS22	Q9GZN4	317 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	PLEKHA5	Q9HAU0	1116 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	BRF2	Q9HAW0	419 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	C20orf141	Q9NUB4	165 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	KIAA1456	Q9P272	454 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	TBC1D14	Q9P2M4	693 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	PCDHGB5	Q9Y5G0	923 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	GRIN2B	Q13224	1484 aa		5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	PCF11	O94913	1555 aa	Known RBP	5.76	□□□□□ -1.49
TCF12-223	ENST00000561235	ADGRF5	Q8IZF2	1346 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	PI4KAP2	A4QPH2	592 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	CGB1	A6NKQ9	187 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235		A6NNC1	897 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.75	□□□□□ -1.49
TCF12-223	ENST00000561235		E5RJQ4	531 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235		F5H0A9	414 aa	Predicted RBP	5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	MASP2	O00187	686 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	PRPF4	O43172	522 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	RNASEH2A	O75792	299 aa	Known RBP	5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	CLEC3B	P05452	202 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	HSPA1A	P0DMV8	641 aa	Known RBP	5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	HSPA1B	P0DMV9	641 aa	Known RBP	5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	CHM	P24386	653 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	CLCNKB	P51801	687 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	RPS3A	P61247	264 aa	Known RBP	5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	GAD2	Q05329	585 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	SLC18A2	Q05940	514 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	PIK3CD-AS1	Q5SR53	167 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	KDELC2	Q7Z4H8	507 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	PCGF5	Q86SE9	256 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	DPP10	Q8N608	796 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	OR4N2	Q8NGD1	307 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	RASSF8	Q8NHQ8	419 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	NTN5	Q8WTR8	489 aa	Predicted RBP	5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	CUL5	Q93034	780 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	SAAL1	Q96ER3	474 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	NUF2	Q9BZD4	464 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	SEMA4C	Q9C0C4	833 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	MSRB1	Q9NZV6	116 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	C11orf21	Q9P2W6	132 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	RAP2C	Q9Y3L5	183 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235	PSAT1	Q9Y617	370 aa		5.75	□□□□□ -1.49
TCF12-223	ENST00000561235		A0A0G2JK05	382 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	TLR2	O60603	784 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	CELA2A	P08217	269 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	SPARC	P09486	303 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	PRR35	P0CG20	571 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	CHRNB1	P11230	501 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	UNG	P13051	313 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	SLC2A4	P14672	509 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	BDNF	P23560	247 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	YWHAQ	P27348	245 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	MAPK4	P31152	587 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	TNFSF8	P32971	234 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	BLK	P51451	505 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	INHBE	P58166	350 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	SET	Q01105	290 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF12-223	ENST00000561235		Q4G0T1	1027 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	C6orf10	Q5SRN2	563 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	SERTAD4-AS1	Q5TG53	156 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	ASPHD1	Q5U4P2	390 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	SNX30	Q5VWJ9	437 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	MZT2B	Q6NZ67	158 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	PXK	Q7Z7A4	578 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	GPSM1	Q86YR5	675 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	C11orf65	Q8NCR3	313 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	ETNPPL	Q8TBG4	499 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	MSI2	Q96DH6	328 aa	Known RBP	5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	PERP	Q96FX8	193 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	RANBP17	Q9H2T7	1088 aa	Known RBP	5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	WDR6	Q9NNW5	1121 aa	Known RBP	5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	PNRC2	Q9NPJ4	139 aa	Known RBP	5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	TBC1D22B	Q9NU19	505 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	TERF2IP	Q9NYB0	399 aa		5.74	□□□□□ -1.49
TCF12-223	ENST00000561235	CBY3	A6NI87	242 aa		5.73	□□□□□ -1.49
TCF12-223	ENST00000561235	RNMT	O43148	476 aa	Known RBP	5.73	□□□□□ -1.49
TCF12-223	ENST00000561235	SEC31A	O94979	1220 aa	Known RBP	5.73	□□□□□ -1.49
TCF12-223	ENST00000561235	KEL	P23276	732 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms