RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SLC31A1O15431 190 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 SPINT1O43278 529 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 DFNA5O60443 496 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 RAMP2O60895 175 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 RNF8O76064 485 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 FTLP02792 175 aaPredicted RBP16.24■□□□□ 0.19
LMX1B-204ENST00000561065 ADRB3P13945 408 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 ITGB7P26010 798 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 L1CAMP32004 1257 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 NUDT1P36639 197 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 ABL2P42684 1182 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 RECQLP46063 649 aaPredicted RBP16.24■□□□□ 0.19
LMX1B-204ENST00000561065 SLC20A2Q08357 652 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 BNIP3Q12983 259 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 FGL2Q14314 439 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 NFKBIBQ15653 356 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 SCYL2Q6P3W7 929 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 GCNT7Q6ZNI0 430 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 ZNF571Q7Z3V5 609 aaPredicted RBP16.24■□□□□ 0.19
LMX1B-204ENST00000561065 IQCHQ86VS3 1027 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 RTL3Q8N8U3 475 aaKnown RBP16.24■□□□□ 0.19
LMX1B-204ENST00000561065 NETO2Q8NC67 525 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 CPLX3Q8WVH0 158 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 SKA1Q96BD8 255 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 PEBP4Q96S96 227 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 HEPHQ9BQS7 1158 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 MAGEH1Q9H213 219 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 ZDHHC6Q9H6R6 413 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 GPATCH2LQ9NWQ4 482 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 ANKRD36A6QL64 1941 aa16.24■□□□□ 0.19
LMX1B-204ENST00000561065 CXorf51AA0A1B0GTR3 108 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 TMEM8BA6NDV4 472 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 EIF3CLB5ME19 914 aaKnown RBP16.23■□□□□ 0.19
LMX1B-204ENST00000561065 PRAMEF26H0Y7S4 382 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 TNFSF14O43557 240 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 EPHB2P29323 1055 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 DNA2P51530 1060 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 NEK3P51956 506 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 MAMLD1Q13495 774 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 POLD3Q15054 466 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-204ENST00000561065 EFHC2Q5JST6 749 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 ATXN7L2Q5T6C5 722 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-204ENST00000561065 SPECC1LQ69YQ0 1117 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 PLEKHA7Q6IQ23 1121 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 NEK5Q6P3R8 708 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 CCNI2Q6ZMN8 369 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-204ENST00000561065 CYP4V2Q6ZWL3 525 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-204ENST00000561065 TMC6Q7Z403 805 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 SLC22A18ASQ8N1D0 253 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 ARFGAP1Q8N6T3 406 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 ISG20Q96AZ6 181 aaKnown RBP16.23■□□□□ 0.19
LMX1B-204ENST00000561065 HMCESQ96FZ2 354 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 PPP1R16AQ96I34 528 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 EIF3CQ99613 913 aaKnown RBP16.23■□□□□ 0.19
LMX1B-204ENST00000561065 ERVMER34-1Q9H9K5 563 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 DYRK4Q9NR20 520 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 FTSJ1Q9UET6 329 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 GGT7Q9UJ14 662 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 HPCAL4Q9UM19 191 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 ITM2BQ9Y287 266 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 FADS3Q9Y5Q0 445 aa16.23■□□□□ 0.19
LMX1B-204ENST00000561065 GOLGA4Q13439 2230 aaKnown RBP16.23■□□□□ 0.19
LMX1B-204ENST00000561065 DDX3XO00571 662 aaKnown RBP eCLIP16.22■□□□□ 0.19
LMX1B-204ENST00000561065 CREB3O43889 395 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 SDC3O75056 442 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 TMCC1O94876 653 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 HTR7P34969 479 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 PBX1P40424 430 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 RXRGP48443 463 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 GEMIN4P57678 1058 aaKnown RBP16.22■□□□□ 0.19
LMX1B-204ENST00000561065 CLDN2P57739 230 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 ACAP1Q15027 740 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 CA9Q16790 459 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 SLC45A4Q5BKX6 768 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 KDM7AQ6ZMT4 941 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 TMPRSS7Q7RTY8 843 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 OR13H1Q8NG92 308 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 OR2AP1Q8NGE2 309 aa16.22■□□□□ 0.19
LMX1B-204ENST00000561065 XPO4Q9C0E2 1151 aaKnown RBP16.22■□□□□ 0.19
LMX1B-204ENST00000561065 WASH4PA8MWX3 477 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 TAF4O00268 1085 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 RAD51BO15315 384 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 YKT6O15498 198 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 KDELR3O43731 214 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 PCDH8O95206 1070 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 GSRP00390 522 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 ITGAVP06756 1048 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 THEGLP0DJG4 465 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 HNRNPA2B1P22626 353 aaKnown RBP16.21■□□□□ 0.19
LMX1B-204ENST00000561065 ARRB1P49407 418 aaPredicted RBP16.21■□□□□ 0.19
LMX1B-204ENST00000561065 ZNF135P52742 658 aaPredicted RBP16.21■□□□□ 0.19
LMX1B-204ENST00000561065 CLDN6P56747 220 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 OVGP1Q12889 678 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 DNAJC3Q13217 504 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 STAT4Q14765 748 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 INAVAQ3KP66 663 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 CCDC157Q569K6 752 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 LRRC73Q5JTD7 316 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 PLPP6Q8IY26 295 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 OXR1Q8N573 874 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms