RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 JMJD7P0C870 316 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 EPB41P11171 864 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 TSHRP16473 764 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 GGCXP38435 758 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 ETV5P41161 510 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 GPD2P43304 727 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 EDRF1Q3B7T1 1238 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 TCERG1LQ5VWI1 586 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 ESRP1Q6NXG1 681 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 DPY19L3Q6ZPD9 716 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 KYQ8NBH2 561 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 KAT5Q92993 513 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 PPP1R16AQ96I34 528 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 TBATAQ96M53 351 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 TRIM62Q9BVG3 475 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 SRRTQ9BXP5 876 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 MUC3BQ9H195 1237 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 TNKS2Q9H2K2 1166 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 POPDC2Q9HBU9 364 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 FOXJ2Q9P0K8 574 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 GULP1Q9UBP9 304 aa13.06□□□□□ -0.32
RABGGTA-213ENST00000560127 C2CD3Q4AC94 2353 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 SYNJ2BP-COX16A0A087WUM0 186 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 BLACEA4D250 179 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 AGRPO00253 132 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 AP1G1O43747 822 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 CLDN11O75508 207 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 RPLP0P05388 317 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 SLC2A3P11169 496 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 ITGB7P26010 798 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 L1CAMP32004 1257 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 CASRP41180 1078 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 YWHAZP63104 245 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 KRT83P78385 493 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 SGCGQ13326 291 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 TAF5Q15542 800 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 C5orf22Q49AR2 442 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 ATL3Q6DD88 541 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 HIST2H2BCQ6DN03 193 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 C22orf39Q6P5X5 142 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 LINGO4Q6UY18 593 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 FAM26EQ8N5C1 309 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 ARL10Q8N8L6 244 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 TMEM74Q96NL1 305 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 SLC12A9Q9BXP2 914 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 CPEB1Q9BZB8 566 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 FAM204AQ9H8W3 233 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 COX16Q9P0S2 106 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 SIRPGQ9P1W8 387 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 PAXBP1Q9Y5B6 917 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 HS3ST4Q9Y661 456 aa13.05□□□□□ -0.32
RABGGTA-213ENST00000560127 POLQO75417 2590 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 A0A1B0GVL5 298 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 C9orf172C9J069 976 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 E5RJQ4 531 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 CETN3O15182 167 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 CNTN5O94779 1100 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 ENDOD1O94919 500 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 PFKFB1P16118 471 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 CCR1P32246 355 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 NOS2P35228 1153 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 ACADSBP45954 432 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 CLCN6P51797 869 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 THOP1P52888 689 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 CDH4P55283 916 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 KCNAB2Q13303 367 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 PTK2BQ14289 1009 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 FAXCQ5TGI0 409 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 DENND1BQ6P3S1 775 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 BORAQ6PGQ7 559 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 PARS2Q7L3T8 475 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 DENND6BQ8NEG7 585 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 PCDH19Q8TAB3 1148 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 ASB12Q8WXK4 309 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 USP7Q93009 1102 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 CENPTQ96BT3 561 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 C2orf49Q9BVC5 232 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 SLC4A5Q9BY07 1137 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 SLC13A1Q9BZW2 595 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 USP25Q9UHP3 1055 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 GGT7Q9UJ14 662 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 PCDHB11Q9Y5F2 797 aa13.04□□□□□ -0.32
RABGGTA-213ENST00000560127 A0A0D9SEW6 157 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 A0A1W2PQ27 194 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 A0A1W2PQ64 194 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 A0A1W2PQC6 194 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 RHOCP08134 193 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 IGFALSP35858 605 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 ABL2P42684 1182 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 RECQLP46063 649 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 POLE2P56282 527 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 ZFP36L1Q07352 338 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 DPYDQ12882 1025 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 ALFQ53S48 1182 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 TMEM110Q86TL2 294 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 STK32AQ8WU08 396 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms