RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PPP1R13BQ96KQ4 1090 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 RPRD1AQ96P16 312 aaPredicted RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 CMKLR1Q99788 373 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 PRMT1Q99873 361 aaKnown RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 C2orf49Q9BVC5 232 aaPredicted RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 C1QTNF2Q9BXJ5 285 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 B3GNT4Q9C0J1 378 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 MUC3BQ9H195 1237 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 LRRN3Q9H3W5 708 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CAAP1Q9H8G2 361 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 POPDC2Q9HBU9 364 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 ST7Q9NRC1 585 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 AKAP7Q9P0M2 348 aaPredicted RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 APOBEC3BQ9UH17 382 aaKnown RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 IL36AQ9UHA7 158 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 XPO7Q9UIA9 1087 aaKnown RBP5.29□□□□□ -1.56
SPG11-208ENST00000558155 TUBD1Q9UJT1 453 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 PCDHA7Q9UN72 937 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 MTMR6Q9Y217 621 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 HS3ST2Q9Y278 367 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 COQ4Q9Y3A0 265 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 LOXL2Q9Y4K0 774 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 PCDHB4Q9Y5E5 795 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 OR51B4Q9Y5P0 310 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 MGAQ8IWI9 3026 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 CACNA1DQ01668 2161 aa5.29□□□□□ -1.56
SPG11-208ENST00000558155 PIEZO2Q9H5I5 2752 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 BLACEA4D250 179 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CLEC18AA5D8T8 446 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 IGLON5A6NGN9 336 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 TMEM110-MUSTN1A8MSY1 372 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 M0QYV0 167 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 NEMP1O14524 444 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 RAD51BO15315 384 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 SPINT1O43278 529 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 AP1G1O43747 822 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 KALRNO60229 2985 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 LEFTY1O75610 366 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 MT-CO1P00395 513 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 AVPP01185 164 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 RPLP0P05388 317 aaKnown RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 ALPIP09923 528 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 ADRB3P13945 408 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 TSHRP16473 764 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 L1CAMP32004 1257 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CCR1P32246 355 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 RPL34P49207 117 aaKnown RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 ATP1A2P50993 1020 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 PDX1P52945 283 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 MAPK10P53779 464 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CDH4P55283 916 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 PFN3P60673 137 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CYP4F2P78329 520 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 PPARDQ03181 441 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 LRMPQ12912 555 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 SRSF6Q13247 344 aaKnown RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 KCNAB2Q13303 367 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 AUHQ13825 339 aaKnown RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 FGL2Q14314 439 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 DRAP1Q14919 205 aaPredicted RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 EDRF1Q3B7T1 1238 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 C8orf34Q49A92 452 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 ERICH6BQ5W0A0 696 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CXorf57Q6NSI4 855 aaKnown RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 CLEC18BQ6UXF7 455 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 DPY19L3Q6ZPD9 716 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 B3GNT8Q7Z7M8 397 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 VASH2Q86V25 355 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 ATCAYQ86WG3 371 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CIR1Q86X95 450 aaPredicted RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 ZFAND4Q86XD8 727 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 GKN2Q86XP6 184 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 DTX1Q86Y01 620 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 PHACTR4Q8IZ21 702 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 GUF1Q8N442 669 aaKnown RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 ARL10Q8N8L6 244 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CLEC18CQ8NCF0 446 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CHST14Q8NCH0 376 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 DENND6BQ8NEG7 585 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 GPBAR1Q8TDU6 330 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CCDC74AQ96AQ1 378 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 ARHGEF26Q96DR7 871 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 INTS4Q96HW7 963 aaKnown RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 PKNOX2Q96KN3 472 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CATSPER2Q96P56 530 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 KLF6Q99612 283 aaPredicted RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 HEPHQ9BQS7 1158 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 FUCA2Q9BTY2 467 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 C1QTNF7Q9BXJ2 289 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 SLC12A9Q9BXP2 914 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CPEB1Q9BZB8 566 aaKnown RBP5.28□□□□□ -1.56
SPG11-208ENST00000558155 FOXP3Q9BZS1 431 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 EPN3Q9H201 632 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 THAP9Q9H5L6 903 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 CFAP45Q9UL16 551 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 GPR34Q9UPC5 381 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 MAPK8IP1Q9UQF2 711 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 TBC1D30Q9Y2I9 924 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 FADS3Q9Y5Q0 445 aa5.28□□□□□ -1.56
SPG11-208ENST00000558155 COL27A1Q8IZC6 1860 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms