RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DUS3LQ96G46 650 aaKnown RBP11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 FAR2Q96K12 515 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 VAT1Q99536 393 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 KIFC1Q9BW19 673 aa11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 MRPL46Q9H2W6 279 aaKnown RBP11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 IPO11Q9UI26 975 aaKnown RBP11.96□□□□□ -0.49
VIPAS39-211ENST00000557658 TRIM24O15164 1050 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 CAPN15O75808 1086 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 STAMBPO95630 424 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 AHSGP02765 367 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 LGALS2P05162 132 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 STMN1P16949 149 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 FGFR3P22607 806 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 ADRA1BP35368 520 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 KPNA2P52292 529 aaKnown RBP11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 PGGT1BP53609 377 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 AIF1P55008 147 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 ZBTB17Q13105 803 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 LRP8Q14114 963 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 MTX3Q5HYI7 312 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 INTS6LQ5JSJ4 861 aaKnown RBP11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 FBXO47Q5MNV8 452 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 REP15Q6BDI9 236 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 POTEHQ6S545 545 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 CHSY3Q70JA7 882 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 CROCCP3Q8IVE0 287 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 MYO1HQ8N1T3 1032 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 NXNL1Q96CM4 212 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 SLC9A7Q96T83 725 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 UHRF1Q96T88 793 aaPredicted RBP11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 TRPC7Q9HCX4 862 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 SPAG4Q9NPE6 437 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 PIGVQ9NUD9 493 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 OLAHQ9NV23 265 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 CACNA2D2Q9NY47 1150 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 SARDHQ9UL12 918 aa11.96□□□□□ -0.5
VIPAS39-211ENST00000557658 TCRBV3S1A0A5B6 114 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 CCDC78A2IDD5 438 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM72CH0Y354 149 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 PSMD3O43242 534 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 SLC25A27O95847 323 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 PGK1P00558 417 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 YBX3P16989 372 aaKnown RBP eCLIP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 NELFEP18615 380 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 FASTKQ14296 549 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 TSTD2Q5T7W7 516 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM72AQ5TYM5 149 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 SYPL2Q5VXT5 272 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM72DQ6L9T8 149 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 LINC00523Q86TU6 105 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM72BQ86X60 149 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 NUP205Q92621 2012 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 HDAC11Q96DB2 347 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 ZNF512Q96ME7 567 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 GPR78Q96P69 363 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 SLC29A1Q99808 456 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 OMDQ99983 421 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 MRPL57Q9BQC6 102 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 ANKRD60Q9BZ19 345 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 R3HDMLQ9H3Y0 253 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 CLK4Q9HAZ1 481 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 FAF1Q9UNN5 650 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 SLC8A2Q9UPR5 921 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM95CA0A1B0GW59 222 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 PSMD12O00232 456 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 UBDO15205 165 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 HTRA2O43464 458 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 BMP10O95393 424 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 ATP5F1P24539 256 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 GABRB3P28472 473 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 TKTP29401 623 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 HCAR3P49019 387 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 NUP107P57740 925 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 DNAJB13P59910 316 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 PPIL2Q13356 520 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 KCTD2Q14681 263 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 AGKQ53H12 422 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 SAMD4BQ5PRF9 694 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 GADL1Q6ZQY3 521 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM43BQ6ZT52 329 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 SIX6OS1Q8N1H7 587 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 SPPL2BQ8TCT7 592 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 NTAN1Q96AB6 310 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 SLCO4A1Q96BD0 722 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 PPWD1Q96BP3 646 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 TNIP3Q96KP6 325 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 SLC2A13Q96QE2 648 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 CIB1Q99828 191 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 DUSP16Q9BY84 665 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 POMKQ9H5K3 350 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 PDGFCQ9NRA1 345 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 RRN3Q9NYV6 651 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 UBP1Q9NZI7 540 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 COL1A2P08123 1366 aa11.95□□□□□ -0.5
VIPAS39-211ENST00000557658 FAM155AB1AL88 458 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 SRP72O76094 671 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-211ENST00000557658 SNRPB2P08579 225 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms