RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 HECAQ9UBI9 543 aaPredicted RBP14.42□□□□□ -0.1
SNX6-210ENST00000557341 GPSM3Q9Y4H4 160 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 IGSF10Q6WRI0 2623 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 SHROOM3Q8TF72 1996 aa14.42□□□□□ -0.1
SNX6-210ENST00000557341 CACNA1GO43497 2377 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 ZSCAN5CA6NGD5 496 aaPredicted RBP14.41□□□□□ -0.1
SNX6-210ENST00000557341 SIGLEC16A6NMB1 481 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 CCP110O43303 1012 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 GSRP00390 522 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 CCDC172P0C7W6 258 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 CKMT2P17540 419 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 DESP17661 470 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 AIF1P55008 147 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 CLDN2P57739 230 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 CYP4F3Q08477 520 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 MAPK8IP2Q13387 824 aaPredicted RBP14.41□□□□□ -0.1
SNX6-210ENST00000557341 CCDC183Q5T5S1 534 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 HES3Q5TGS1 186 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 KYAT3Q6YP21 454 aaKnown RBP14.41□□□□□ -0.1
SNX6-210ENST00000557341 ZNF354CQ86Y25 554 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 RTL3Q8N8U3 475 aaKnown RBP14.41□□□□□ -0.1
SNX6-210ENST00000557341 OR6K2Q8NGY2 324 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 RAB7BQ96AH8 199 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 FEM1CQ96JP0 617 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 MCEEQ96PE7 176 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 AGPAT1Q99943 283 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 OSBPL1AQ9BXW6 950 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 KLHL11Q9NVR0 708 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 RAXQ9Y2V3 346 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 FADS3Q9Y5Q0 445 aa14.41□□□□□ -0.1
SNX6-210ENST00000557341 COL27A1Q8IZC6 1860 aaPredicted RBP14.41□□□□□ -0.1
SNX6-210ENST00000557341 TCRBV5S1A1TA0A578 114 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 LRRC10BA6NIK2 292 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 KRIT1O00522 736 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 PIAS2O75928 621 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 JUPP14923 745 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 FERP16591 822 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 DGKAP23743 735 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 ACP1P24666 158 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 EPHB2P29323 1055 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 ZNF143P52747 638 aaPredicted RBP14.4□□□□□ -0.1
SNX6-210ENST00000557341 ZNF211Q13398 564 aaPredicted RBP14.4□□□□□ -0.1
SNX6-210ENST00000557341 NCAPHQ15003 741 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 PROX2Q3B8N5 592 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 ZNF805Q5CZA5 627 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 SCYL2Q6P3W7 929 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 APTXQ7Z2E3 356 aaKnown RBP14.4□□□□□ -0.1
SNX6-210ENST00000557341 DCP2Q8IU60 420 aaKnown RBP14.4□□□□□ -0.1
SNX6-210ENST00000557341 SLC22A18ASQ8N1D0 253 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 AOPEPQ8N6M6 819 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 OR4C6Q8NH72 309 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 ARHGEF26Q96DR7 871 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 IFT43Q96FT9 208 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 GDAP1L1Q96MZ0 367 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 EPAS1Q99814 870 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 SLC17A9Q9BYT1 436 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 MAGEB5Q9BZ81 275 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 HSD3B7Q9H2F3 369 aa14.4□□□□□ -0.1
SNX6-210ENST00000557341 URB1O60287 2271 aaKnown RBP14.4□□□□□ -0.1
SNX6-210ENST00000557341 C16orf96A6NNT2 1141 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 NEMP1O14524 444 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 FFAR2O15552 330 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 TSPAN6O43657 245 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 SIGLEC6O43699 453 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 KDELR3O43731 214 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 TMCC1O94876 653 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 IGSF6O95976 241 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 UGT2B4P06133 528 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 ALPPL2P10696 532 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 GKP32189 559 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 ABL2P42684 1182 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 CLDN6P56747 220 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 RPL7AP62424 266 aaKnown RBP14.39□□□□□ -0.11
SNX6-210ENST00000557341 DAB2P98082 770 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 FGL2Q14314 439 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 PPP1R15BQ5SWA1 713 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 PPP1R2P3Q6NXS1 205 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 DCUN1D2Q6PH85 259 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 LEKR1Q6ZMV7 388 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 Q6ZSR6 202 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 PYROXD2Q8N2H3 581 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 SLC25A45Q8N413 288 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 DENND6BQ8NEG7 585 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 CASKIN2Q8WXE0 1202 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 CNPY3Q9BT09 278 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 NAT10Q9H0A0 1025 aaKnown RBP14.39□□□□□ -0.11
SNX6-210ENST00000557341 CATSPERBQ9H7T0 1116 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 SCUBE2Q9NQ36 999 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 GPR27Q9NS67 375 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 UCKL1Q9NWZ5 548 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 DNAJC28Q9NX36 388 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 HS3ST3A1Q9Y663 406 aa14.39□□□□□ -0.11
SNX6-210ENST00000557341 POM121BA6NF01 834 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 TRIM38O00635 465 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 FPGTO14772 594 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 FGF10O15520 208 aaPredicted RBP14.38□□□□□ -0.11
SNX6-210ENST00000557341 BUB1O43683 1085 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 CREB3O43889 395 aa14.38□□□□□ -0.11
SNX6-210ENST00000557341 POP4O95707 220 aaKnown RBP14.38□□□□□ -0.11
SNX6-210ENST00000557341 PAK4O96013 591 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms