RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 EDEM1Q92611 657 aa13.03□□□□□ -0.32
PSEN1-219ENST00000556951 WDR24Q96S15 920 aa13.03□□□□□ -0.32
PSEN1-219ENST00000556951 OLA1Q9NTK5 396 aaKnown RBP13.03□□□□□ -0.32
PSEN1-219ENST00000556951 UCKL1Q9NWZ5 548 aa13.03□□□□□ -0.32
PSEN1-219ENST00000556951 PCDHGC3Q9UN70 934 aa13.03□□□□□ -0.32
PSEN1-219ENST00000556951 ERVW-1Q9UQF0 538 aa13.03□□□□□ -0.32
PSEN1-219ENST00000556951 U3KQA8 63 aa13.03□□□□□ -0.32
PSEN1-219ENST00000556951 PDZD2O15018 2839 aa13.03□□□□□ -0.32
PSEN1-219ENST00000556951 A0A1B0GTL3 188 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 RNASEH1O60930 286 aaKnown RBP13.02□□□□□ -0.33
PSEN1-219ENST00000556951 USP12O75317 370 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 MOCS3O95396 460 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 ASLP04424 464 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 MYBL1P10243 752 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 BRD2P25440 801 aaKnown RBP13.02□□□□□ -0.33
PSEN1-219ENST00000556951 NAP1L1P55209 391 aaKnown RBP13.02□□□□□ -0.33
PSEN1-219ENST00000556951 GABREP78334 506 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 FOXK1P85037 733 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.33
PSEN1-219ENST00000556951 STILQ15468 1287 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 CNGA2Q16280 664 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 MMS22LQ6ZRQ5 1243 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 SND1Q7KZF4 910 aaKnown RBP eCLIP13.02□□□□□ -0.33
PSEN1-219ENST00000556951 IQCHQ86VS3 1027 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 TICAM1Q8IUC6 712 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 LSMEM2Q8N112 164 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 SLC35F6Q8N357 371 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 TMEM35BQ8NCS4 154 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 TRIM58Q8NG06 486 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 TFAP2BQ92481 460 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 TRIM11Q96F44 468 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 VCPIP1Q96JH7 1222 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 ALS2CR12Q96Q35 445 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 ZSWIM1Q9BR11 485 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 POLR1BQ9H9Y6 1135 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 STIM2Q9P246 746 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 CYTH4Q9UIA0 394 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 CA5BQ9Y2D0 317 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 ADGRG4Q8IZF6 3080 aa13.02□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3DA0A087WVF3 549 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3IA0A087WXS9 549 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3EA0A087X179 549 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3KA0A087X1G2 549 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 CTAGE9A4FU28 777 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3FA6NER0 549 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3LB9A6J9 549 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 ACSL4O60488 711 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 CYP1A2P05177 515 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3HP0C7X1 549 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 C5AR1P21730 350 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 DGKAP23743 735 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 CDH5P33151 784 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 NOP2P46087 812 aaKnown RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 NSFP46459 744 aaKnown RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 PSMD8P48556 350 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 ST8SIA6P61647 398 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 RPS24P62847 133 aaKnown RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 CENPCQ03188 943 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 SGO2Q562F6 1265 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 SLC45A4Q5BKX6 768 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 NAA35Q5VZE5 725 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3GQ6DHY5 549 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3CQ6IPX1 549 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 MSANTD2Q6P1R3 559 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 DNAAF5Q86Y56 855 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 PHF13Q86YI8 300 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 RHOT2Q8IXI1 618 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TBC1D3Q8IZP1 549 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 OR4C6Q8NH72 309 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 CPA5Q8WXQ8 436 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 PRR11Q96HE9 360 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 PRICKLE1Q96MT3 831 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 NAPGQ99747 312 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 THAP2Q9H0W7 228 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 SALL4Q9UJQ4 1053 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 TPX2Q9ULW0 747 aaKnown RBP13.01□□□□□ -0.33
PSEN1-219ENST00000556951 CEP83Q9Y592 693 aa13.01□□□□□ -0.33
PSEN1-219ENST00000556951 EDDM13A0A1B0GTR0 161 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 EFSO43281 561 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 BUB1O43683 1085 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 LZTS3O60299 673 aaPredicted RBP13□□□□□ -0.33
PSEN1-219ENST00000556951 CSO75390 466 aaKnown RBP13□□□□□ -0.33
PSEN1-219ENST00000556951 SRPRAP08240 638 aaKnown RBP13□□□□□ -0.33
PSEN1-219ENST00000556951 CKMT1AP12532 417 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 MAT2AP31153 395 aaKnown RBP13□□□□□ -0.33
PSEN1-219ENST00000556951 HADHBP55084 474 aaKnown RBP13□□□□□ -0.33
PSEN1-219ENST00000556951 NOMO3P69849 1222 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
PSEN1-219ENST00000556951 OVGP1Q12889 678 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 TUBB2AQ13885 445 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 IGF2-ASQ6U949 168 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 LCLAT1Q6UWP7 414 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 PRPF39Q86UA1 669 aaKnown RBP13□□□□□ -0.33
PSEN1-219ENST00000556951 MFN1Q8IWA4 741 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 MCOLN2Q8IZK6 566 aa13□□□□□ -0.33
PSEN1-219ENST00000556951 APCDD1Q8J025 514 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms