RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 HMBOX1Q6NT76 420 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 CCDC81Q6ZN84 652 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 PTAR1Q7Z6K3 402 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-203ENST00000554873 GRAMD2AQ8IUY3 354 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 CENPOQ9BU64 300 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 EFCAB1Q9HAE3 211 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 SUCOQ9UBS9 1254 aaKnown RBP15.85■□□□□ 0.13
SYNE3-203ENST00000554873 FBXO9Q9UK97 447 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-203ENST00000554873 ANGPTL3Q9Y5C1 460 aa15.85■□□□□ 0.13
SYNE3-203ENST00000554873 IGKV6D-21A0A0A0MT36 114 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 C9IYK1 514 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 MED7O43513 233 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 ENDOD1O94919 500 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 KCNH1O95259 989 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 RALBP11234 206 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 CDH6P55285 790 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 OSTNP61366 133 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 IFITM3Q01628 133 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 SLC43A3Q8NBI5 491 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 FAM156AQ8NDB6 213 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 S100ZQ8WXG8 99 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 DUS3LQ96G46 650 aaKnown RBP15.84■□□□□ 0.13
SYNE3-203ENST00000554873 POPDC2Q9HBU9 364 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 AKIP1Q9NQ31 210 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 ADAMTS5Q9UNA0 930 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 RAD23AP54725 363 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 PRKCQQ04759 706 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 MERTKQ12866 999 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 TRIM25Q14258 630 aaKnown RBP15.84■□□□□ 0.13
SYNE3-203ENST00000554873 HERC3Q15034 1050 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 SNX31Q8N9S9 440 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 ZNF280CQ8ND82 737 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 ACMSDQ8TDX5 336 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 SLCO4A1Q96BD0 722 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 OR52B2Q96RD2 323 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 TWNKQ96RR1 684 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 SDCBP2Q9H190 292 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 ACAD9Q9H845 621 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 MRPL40Q9NQ50 206 aaKnown RBP15.84■□□□□ 0.13
SYNE3-203ENST00000554873 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.84■□□□□ 0.13
SYNE3-203ENST00000554873 AFG3L2Q9Y4W6 797 aa15.84■□□□□ 0.13
SYNE3-203ENST00000554873 AREL1O15033 823 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 TADA2AO75478 443 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 UGT2B4P06133 528 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 BMP2P12643 396 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 SERPINB1P30740 379 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 OAZ1P54368 228 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 STXBP2Q15833 593 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 IQSEC1Q6DN90 963 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 UGT3A1Q6NUS8 523 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 ABRAXAS1Q6UWZ7 409 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 AGMOQ6ZNB7 445 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 CYP4V2Q6ZWL3 525 aaPredicted RBP15.83■□□□□ 0.13
SYNE3-203ENST00000554873 CAND1Q86VP6 1230 aaKnown RBP15.83■□□□□ 0.13
SYNE3-203ENST00000554873 TTLL6Q8N841 843 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 SLC4A11Q8NBS3 891 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 PNPT1Q8TCS8 783 aaKnown RBP15.83■□□□□ 0.13
SYNE3-203ENST00000554873 MCRS1Q96EZ8 462 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 GLT1D1Q96MS3 346 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 TCF12Q99081 682 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 ADAMTS10Q9H324 1103 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 TRIT1Q9H3H1 467 aaKnown RBP15.83■□□□□ 0.13
SYNE3-203ENST00000554873 PDZD7Q9H5P4 517 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 NRBP2Q9NSY0 501 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 C20orf96Q9NUD7 363 aaPredicted RBP15.83■□□□□ 0.13
SYNE3-203ENST00000554873 PCDHB12Q9Y5F1 795 aa15.83■□□□□ 0.13
SYNE3-203ENST00000554873 PARP14Q460N5 1801 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 MAFO75444 373 aaPredicted RBP15.83■□□□□ 0.12
SYNE3-203ENST00000554873 ALX3O95076 343 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 KRT19P08727 400 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 CLK3P49761 638 aaKnown RBP15.83■□□□□ 0.12
SYNE3-203ENST00000554873 EFNA5P52803 228 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 IST1P53990 364 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 HMGCS2P54868 508 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 TUBA3CQ13748 450 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 SURF1Q15526 300 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 LRIT3Q3SXY7 679 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 SLC36A3Q495N2 470 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 TMC5Q6UXY8 1006 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 PPWD1Q96BP3 646 aaKnown RBP15.83■□□□□ 0.12
SYNE3-203ENST00000554873 ASNSD1Q9NWL6 643 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 HMGXB4Q9UGU5 601 aa15.83■□□□□ 0.12
SYNE3-203ENST00000554873 CNOT6Q9ULM6 557 aaKnown RBP15.83■□□□□ 0.12
SYNE3-203ENST00000554873 TBKBP1A7MCY6 615 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 DLGAP1O14490 977 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 KCNN4O15554 427 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 HOXC11O43248 304 aaPredicted RBP15.82■□□□□ 0.12
SYNE3-203ENST00000554873 ICMTO60725 284 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 SEC14L2O76054 403 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 PRKCAP17252 672 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 CNTFP26441 200 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 ICAM3P32942 547 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 LEPRP48357 1165 aaKnown RBP15.82■□□□□ 0.12
SYNE3-203ENST00000554873 PHC1P78364 1004 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 CAMK1DQ8IU85 385 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 PARP8Q8N3A8 854 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 MAPK15Q8TD08 544 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 YTHDF1Q9BYJ9 559 aaKnown RBP15.82■□□□□ 0.12
SYNE3-203ENST00000554873 NEK6Q9HC98 313 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 PAK5Q9P286 719 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms