RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ALKBH1Q13686 389 aaKnown RBP1.67□□□□□ -2.14
PRPF39-208ENST00000554785 THOC5Q13769 683 aaKnown RBP1.67□□□□□ -2.14
PRPF39-208ENST00000554785 ANXA2RQ3ZCQ2 193 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 INTS11Q5TA45 600 aaKnown RBP1.67□□□□□ -2.14
PRPF39-208ENST00000554785 JAKMIP3Q5VZ66 844 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 ATG16L1Q676U5 607 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 ANO7Q6IWH7 933 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 DENND1BQ6P3S1 775 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 DHRS13Q6UX07 377 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 IRF2BP2Q7Z5L9 587 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 TFAP2DQ7Z6R9 452 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 RFX6Q8HWS3 928 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 UEVLDQ8IX04 471 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 ESX1Q8N693 406 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 ENDOVQ8N8Q3 282 aaKnown RBP1.67□□□□□ -2.14
PRPF39-208ENST00000554785 NRACQ8N912 160 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 NAXEQ8NCW5 288 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 DENND1AQ8TEH3 1009 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 STAMQ92783 540 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 KCNJ9Q92806 393 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 ATP2A3Q93084 1043 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 P2RY11Q96G91 374 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 PPP1R10Q96QC0 940 aaKnown RBP1.67□□□□□ -2.14
PRPF39-208ENST00000554785 HERC2P3Q9BVR0 1158 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 ZNF69Q9UC07 566 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 C4BP0C0L5 1744 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 USP54Q70EL1 1684 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 TRPM1Q7Z4N2 1603 aa1.67□□□□□ -2.14
PRPF39-208ENST00000554785 PXDNLA1KZ92 1463 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 PIK3C2GO75747 1445 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 PPIP5K1Q6PFW1 1433 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 COL24A1Q17RW2 1714 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 KIAA1551Q9HCM1 1747 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 EMSYQ7Z589 1322 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 CCDC196A0A1B0GTZ2 297 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 NPIPB13A6NJU9 1138 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 NPIPB5A8MRT5 1133 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 NPIPB4C9JG80 1138 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 RRHO14718 337 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SYN3O14994 580 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 DHX16O60231 1041 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 LYL1P12980 280 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 AKR1A1P14550 325 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 PKMP14618 531 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 AVPR2P30518 371 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TUBP50607 506 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ADPRHP54922 357 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 LINC00205P59089 165 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 B4GALNT1Q00973 533 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 GOLGA8FQ08AF8 430 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 G3BP1Q13283 466 aaKnown RBP eCLIP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MTA1Q13330 715 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ZNF260Q3ZCT1 412 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 RUNDC3AQ59EK9 446 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 WDR45BQ5MNZ6 344 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 LIPMQ5VYY2 423 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MIS18BP1Q6P0N0 1132 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TMEM200AQ86VY9 491 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 RHPN2Q8IUC4 686 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TEX19Q8NA77 164 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ZNF398Q8TD17 642 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 PIGKQ92643 395 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 HTRA1Q92743 480 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 HVCN1Q96D96 273 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MASTLQ96GX5 879 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 PPM1MQ96MI6 270 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 FCRL5Q96RD9 977 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SEC62Q99442 399 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 GATA5Q9BWX5 397 aaPredicted RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 HDHD5Q9BXW7 423 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 GPR63Q9BZJ6 419 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TRIM31Q9BZY9 425 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 UBA5Q9GZZ9 404 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ERVK-5Q9HDB9 667 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SLC22A11Q9NSA0 550 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 THAP1Q9NVV9 213 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TRNAU1APQ9NX07 287 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TUBA8Q9NY65 449 aaPredicted RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 KLQ9UEF7 1012 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SLC25A13Q9UJS0 675 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ABT1Q9ULW3 272 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SUFUQ9UMX1 484 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ITGB4P16144 1822 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ARFGEF1Q9Y6D6 1849 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 COL18A1P39060 1754 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 CPSF1Q10570 1443 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 C4AP0C0L4 1744 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MYO15AQ9UKN7 3530 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 USP47Q96K76 1375 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 A6NLC8 198 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MCIDASD6RGH6 385 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 J3KRW8 73 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 PEX12O00623 359 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 INPPL1O15357 1258 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 EPB41L2O43491 1005 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 USP12O75317 370 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 METTL18O95568 372 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 PLAUP00749 431 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms