RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CREB3L4Q8TEY5 395 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 EDARADDQ8WWZ3 215 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RIN2Q8WYP3 895 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 STAMQ92783 540 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 KIFAP3Q92845 792 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ATP2A3Q93084 1043 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 NUDCD1Q96RS6 583 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TREX2Q9BQ50 279 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 NUP85Q9BW27 656 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 STK33Q9BYT3 514 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FRMD8P1Q9BZ68 369 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF518BQ9C0D4 1074 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 KCNF1Q9H3M0 494 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 XKR8Q9H6D3 395 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 EVA1AQ9H8M9 152 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FAM204AQ9H8W3 233 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 KIF9Q9HAQ2 790 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TRIM39Q9HCM9 518 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PNPLA8Q9NP80 782 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 OBP2BQ9NPH6 170 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 NRIP3Q9NQ35 241 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ENTPD7Q9NQZ7 604 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 AGPAT5Q9NUQ2 364 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FAM86C1Q9NVL1 165 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 SOHLH2Q9NX45 425 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 INVSQ9Y283 1065 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RBM8AQ9Y5S9 174 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 SNX9Q9Y5X1 595 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TNRC6BQ9UPQ9 1833 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CCDC151A5D8V7 595 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 POM121BA6NF01 834 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 LRRIQ3A6PVS8 624 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TRDMT1O14717 391 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 SMAD6O43541 496 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF862O60290 1169 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 SYNCRIPO60506 623 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 NOL3O60936 208 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CPNE3O75131 537 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RECQL4O94761 1208 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TNFRSF6BO95407 300 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 NPTXRO95502 500 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CXCL14O95715 111 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ENO2P09104 434 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 SP9P0CG40 484 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PNMA6AP0CW24 399 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 COL6A2P12110 1019 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PDCP20941 246 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 AKT1P31749 480 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PSMC2P35998 433 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TXLNAP40222 546 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 GRIA2P42262 883 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 POU3F4P49335 361 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PSMD7P51665 324 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CCR9P51686 369 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 MFAP3P55082 362 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ARF3P61204 181 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 KRT85P78386 507 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ARF1P84077 181 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CLCQ05315 142 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 BTKQ06187 659 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 MAPK7Q13164 816 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 KLF1Q13351 362 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CAMK2GQ13555 558 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 HNRNPDQ14103 355 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 SQLEQ14534 574 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 SNCBQ16143 134 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CYP2A13Q16696 494 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PTPRNQ16849 979 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TPD52L1Q16890 204 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FAM187BQ17R55 369 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CYP27C1Q4G0S4 372 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FNDC3BQ53EP0 1204 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 LRRC23Q53EV4 343 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 UBXN11Q5T124 520 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 SNX30Q5VWJ9 437 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 BORAQ6PGQ7 559 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PAPD4Q6PIY7 484 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 C6orf89Q6UWU4 347 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF852Q6ZMS4 543 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ARHGAP22Q7Z5H3 698 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CCDC25Q86WR0 208 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 PLA2G4DQ86XP0 818 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TUSC5Q8IXB3 177 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 MAML2Q8IZL2 1156 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RBBP8NLQ8NC74 664 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ZMIZ2Q8NF64 920 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TSPEARQ8WU66 669 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 DIO2Q92813 273 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 DNASE1L2Q92874 299 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TNFRSF25Q93038 417 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 KIAA1143Q96AT1 154 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF707Q96C28 371 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RPGRIP1Q96KN7 1286 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TEKT5Q96M29 485 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ATP6V0BQ99437 205 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 COQ7Q99807 217 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RTKNQ9BST9 563 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 STRA6Q9BX79 667 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 NUSAP1Q9BXS6 441 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FAM49AQ9H0Q0 323 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms