RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SPAARA0A1B0GVQ0 90 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 TMEM191CA6NGB0 347 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 SMAPO00193 183 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 DDX3XO00571 662 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 KDELR3O43731 214 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 MAGEC1O60732 1142 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 RNGTTO60942 597 aaKnown RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 CD160O95971 181 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 GSRP00390 522 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 FTLP02792 175 aaPredicted RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 PSMA2P25787 234 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 ITGB7P26010 798 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 ACVRL1P37023 503 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 CCNHP51946 323 aaPredicted RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 ZNF135P52742 658 aaPredicted RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 UBASH3AP57075 661 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 TAS2R38P59533 333 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 OGDHQ02218 1023 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 FOXC1Q12948 553 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 TRIP6Q15654 476 aaKnown RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 INAVAQ3KP66 663 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 PARP15Q460N3 678 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 CARD16Q5EG05 197 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 ERN2Q76MJ5 926 aaKnown RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 PSTKQ8IV42 348 aaKnown RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 UMODL1-AS1Q8N2C9 162 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 OXR1Q8N573 874 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 MFSD2AQ8NA29 543 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 CHST14Q8NCH0 376 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 BAHD1Q8TBE0 780 aaPredicted RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 GRIN3AQ8TCU5 1115 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 ARRDC3Q96B67 414 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 SERAC1Q96JX3 654 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 CDC6Q99741 560 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 HEPHQ9BQS7 1158 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 ISCUQ9H1K1 167 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 TNKS2Q9H2K2 1166 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 NOL6Q9H6R4 1146 aaKnown RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 ERVMER34-1Q9H9K5 563 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 MRPL47Q9HD33 250 aaKnown RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 GDF3Q9NR23 364 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 AASDHPPTQ9NRN7 309 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 ARHGAP20Q9P2F6 1191 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 CNOT8Q9UFF9 292 aaKnown RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 PCDHB9Q9Y5E1 797 aa10.6□□□□□ -0.71
PTCD2P1-201ENST00000554393 PTPRBP23467 1997 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 ANKRD36A6QL64 1941 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 A0A1B0GTQ1 180 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 TMCO5BA8MYB1 307 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 PRAMEF26H0Y7S4 382 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 H0Y8X5 98 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 PLK4O00444 970 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 AP1G1O43747 822 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 LEFTY1O75610 366 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 RNF8O76064 485 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 WNT1P04628 370 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 GRK6P43250 576 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 NEK3P51956 506 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 SNRPD1P62314 119 aaKnown RBP10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 FAM193AP78312 1265 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 ZBED6P86452 979 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 ZSCAN23Q3MJ62 389 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 POM121L1PQ3SYA9 428 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 INO80DQ53TQ3 878 aaPredicted RBP10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 KCNT1Q5JUK3 1230 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 HGSNATQ68CP4 663 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 LAYNQ6UX15 382 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 VPS36Q86VN1 386 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 HORMAD1Q86X24 394 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 PYROXD2Q8N2H3 581 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 OR2AP1Q8NGE2 309 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 SETD7Q8WTS6 366 aaKnown RBP10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 RAB7BQ96AH8 199 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 ZNF653Q96CK0 615 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 CAMK1GQ96NX5 476 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 ELF4Q99607 663 aaPredicted RBP10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 OSBPL1AQ9BXW6 950 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 MAGEB5Q9BZ81 275 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 SLC24A3Q9HC58 644 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 CAPN11Q9UMQ6 739 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 AP4E1Q9UPM8 1137 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 NEUROG3Q9Y4Z2 214 aa10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 ARID1BQ8NFD5 2236 aaPredicted RBP10.59□□□□□ -0.71
PTCD2P1-201ENST00000554393 FAM221BA6H8Z2 402 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 TLR4O00206 839 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 WNT9AO14904 365 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 CREB3O43889 395 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 SERPING1P05155 500 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 TPM3P06753 285 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 ADRB3P13945 408 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 PCK1P35558 622 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 ARRB1P49407 418 aaPredicted RBP10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 NDST2P52849 883 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 NXPH1P58417 271 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 TPI1P60174 286 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 SERINC3Q13530 473 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 ZNF284Q2VY69 593 aa10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 TDRD12Q587J7 1177 aaKnown RBP10.58□□□□□ -0.72
PTCD2P1-201ENST00000554393 ERMARDQ5T6L9 678 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms