RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CHFRQ96EP1 664 aa14.71□□□□□ -0.05
SHMT2-210ENST00000553950 LRIG1Q96JA1 1093 aa14.71□□□□□ -0.05
SHMT2-210ENST00000553950 TRIM31Q9BZY9 425 aa14.71□□□□□ -0.05
SHMT2-210ENST00000553950 PHACTR1Q9C0D0 580 aa14.71□□□□□ -0.05
SHMT2-210ENST00000553950 DPH5Q9H2P9 285 aa14.71□□□□□ -0.05
SHMT2-210ENST00000553950 EPB41L5Q9HCM4 733 aa14.71□□□□□ -0.05
SHMT2-210ENST00000553950 FAM153AQ9UHL3 310 aa14.71□□□□□ -0.05
SHMT2-210ENST00000553950 FCF1Q9Y324 198 aaKnown RBP14.71□□□□□ -0.05
SHMT2-210ENST00000553950 ARIH1Q9Y4X5 557 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-210ENST00000553950 PRRT4C9JH25 899 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 TRIM24O15164 1050 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 INSIG1O15503 277 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 AP2A1O95782 977 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 CD160O95971 181 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 APRTP07741 180 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 BMP1P13497 986 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 ETS1P14921 441 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 CR2P20023 1033 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 NFKBIAP25963 317 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 SERPINA4P29622 427 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 CD68P34810 354 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 CTSOP43234 321 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 RPL21P46778 160 aaKnown RBP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 GALK1P51570 392 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 MRPS21P82921 87 aaKnown RBP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 HLTFQ14527 1009 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 ZNF234Q14588 700 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 PON2Q15165 354 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 DLG2Q15700 870 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 MAP9Q49MG5 647 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 RNASEH2BQ5TBB1 312 aaKnown RBP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 ARMC3Q5W041 872 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 LEKR1Q6ZMV7 388 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 DSG4Q86SJ6 1040 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 RNF135Q8IUD6 432 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 SYNPOQ8N3V7 929 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 ZNF513Q8N8E2 541 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 GLIS1Q8NBF1 620 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 CYB5D2Q8WUJ1 264 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 RPL10LQ96L21 214 aaKnown RBP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 MRGPRX3Q96LB0 322 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 SEMA3CQ99985 751 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 OSBPL1AQ9BXW6 950 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 ATP13A3Q9H7F0 1226 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 XAB2Q9HCS7 855 aaKnown RBP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 GDF3Q9NR23 364 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 THAP10Q9P2Z0 257 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-210ENST00000553950 SUN2Q9UH99 717 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 ANAPC5Q9UJX4 755 aa14.7□□□□□ -0.06
SHMT2-210ENST00000553950 BHMG1C9JSJ3 638 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-210ENST00000553950 CTIFO43310 598 aaKnown RBP14.69□□□□□ -0.06
SHMT2-210ENST00000553950 METTL18O95568 372 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 MT-CO1P00395 513 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 SCNN1BP51168 640 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 TERF1P54274 439 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 MAXP61244 160 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 DSC2Q02487 901 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 ELAVL3Q14576 367 aaKnown RBP14.69□□□□□ -0.06
SHMT2-210ENST00000553950 KCNJ11Q14654 390 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 STARD3Q14849 445 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 PTPRNQ16849 979 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 ERCC6LQ2NKX8 1250 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 HNRNPA1L2Q32P51 320 aaKnown RBP14.69□□□□□ -0.06
SHMT2-210ENST00000553950 CARD16Q5EG05 197 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 DGKKQ5KSL6 1271 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 HIBCHQ6NVY1 386 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-210ENST00000553950 TXNDC11Q6PKC3 985 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 SRLQ86TD4 932 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 CHPFQ8IZ52 775 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 GJD3Q8N144 294 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 PGBD5Q8N414 524 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 MCUQ8NE86 351 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 CPT1BQ92523 772 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 ZNF419Q96HQ0 510 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-210ENST00000553950 NELL2Q99435 816 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 TM6SF2Q9BZW4 377 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 ETNK1Q9HBU6 452 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 DMGDHQ9UI17 866 aaKnown RBP14.69□□□□□ -0.06
SHMT2-210ENST00000553950 SNX24Q9Y343 169 aa14.69□□□□□ -0.06
SHMT2-210ENST00000553950 WASH3PC4AMC7 463 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 PPFIA2O75334 1257 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 ERLIN1O75477 346 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 SUN1O94901 812 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 POP4O95707 220 aaKnown RBP14.68□□□□□ -0.06
SHMT2-210ENST00000553950 EPOP01588 193 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 MLNP12872 115 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 HLA-DPA1P20036 260 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 IVDP26440 423 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 CD86P42081 329 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 NUMBP49757 651 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 CCNHP51946 323 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-210ENST00000553950 ITGA8P53708 1063 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 NRLP54845 237 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 RPL26P61254 145 aaKnown RBP14.68□□□□□ -0.06
SHMT2-210ENST00000553950 BCL2L1Q07817 233 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 ENPP2Q13822 863 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 TJAP1Q5JTD0 557 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 CFAP58Q5T655 872 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 EGFLAMQ63HQ2 1017 aa14.68□□□□□ -0.06
SHMT2-210ENST00000553950 FSTL4Q6MZW2 842 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms