RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 LACTB2Q53H82 288 aaPredicted RBP14.07□□□□□ -0.16
PRPF39-204ENST00000553605 PHF19Q5T6S3 580 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 ZNF787Q6DD87 383 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 FBXL22Q6P050 247 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 SHC4Q6S5L8 630 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 LINC00301Q8NCQ3 95 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 ASB12Q8WXK4 309 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 TFAP2BQ92481 460 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 RPRD1AQ96P16 312 aaPredicted RBP14.07□□□□□ -0.16
PRPF39-204ENST00000553605 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 CDH19Q9H159 772 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 MUC3BQ9H195 1237 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 TNKS2Q9H2K2 1166 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 EXOC1Q9NV70 894 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 GPR34Q9UPC5 381 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 CENPEQ02224 2701 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 UNC13CQ8NB66 2214 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 CELSR2Q9HCU4 2923 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 A1L4Q6 167 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 PRR19A6NJB7 356 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 TSPAN6O43657 245 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 SNAP91O60641 907 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 VPS4BO75351 444 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 TRUB2O95900 331 aaKnown RBP14.06□□□□□ -0.16
PRPF39-204ENST00000553605 CTSEP14091 401 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 ITGB7P26010 798 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 EIF4A3P38919 411 aaKnown RBP14.06□□□□□ -0.16
PRPF39-204ENST00000553605 UQCRFS1P47985 274 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 MXI1P50539 228 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 BLKP51451 505 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 YWHAEP62258 255 aaKnown RBP14.06□□□□□ -0.16
PRPF39-204ENST00000553605 TCEA2Q15560 299 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 CNGA2Q16280 664 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 MACC1Q6ZN28 852 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 DPY19L3Q6ZPD9 716 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 BEND5Q7L4P6 421 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 SLITRK4Q8IW52 837 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 GRAMD1CQ8IYS0 662 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 CENPTQ96BT3 561 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 EDEM3Q9BZQ6 932 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 AKAP7Q9P0M2 348 aaPredicted RBP14.06□□□□□ -0.16
PRPF39-204ENST00000553605 APPL1Q9UKG1 709 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 VPS4AQ9UN37 437 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 WASF2Q9Y6W5 498 aa14.06□□□□□ -0.16
PRPF39-204ENST00000553605 M0QYV0 167 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 NKX2-8O15522 239 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 SART1O43290 800 aaKnown RBP14.05□□□□□ -0.16
PRPF39-204ENST00000553605 PPP6R2O75170 966 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 ENDOD1O94919 500 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 IGLV3-25P01717 112 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 CCL4P13236 92 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 GLB1P16278 677 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 IRAK1P51617 712 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 ARSDP51689 593 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 CLCN6P51797 869 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 HK3P52790 923 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 C16orf72Q14CZ0 275 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 NFIL3Q16649 462 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 CAPRIN2Q6IMN6 1127 aaKnown RBP14.05□□□□□ -0.16
PRPF39-204ENST00000553605 TMPRSS9Q7Z410 1059 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 GKN2Q86XP6 184 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 TAAR9Q96RI9 348 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 PSMB7Q99436 277 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 C2orf49Q9BVC5 232 aaPredicted RBP14.05□□□□□ -0.16
PRPF39-204ENST00000553605 TRIM62Q9BVG3 475 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 SEMA6CQ9H3T2 930 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 VPS51Q9UID3 782 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 VANGL2Q9ULK5 521 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 TBC1D30Q9Y2I9 924 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 SDK2Q58EX2 2172 aa14.05□□□□□ -0.16
PRPF39-204ENST00000553605 NEMP1O14524 444 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 CAPN5O15484 640 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-204ENST00000553605 CUTAO60888 179 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 CLDN11O75508 207 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 CNTN5O94779 1100 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 SLC2A3P11169 496 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 PNLIPP16233 465 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 GNLYP22749 145 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 ELAVL4P26378 380 aaKnown RBP14.04□□□□□ -0.16
PRPF39-204ENST00000553605 UGT1A3P35503 534 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 IGFALSP35858 605 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 MCCD1P59942 119 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-204ENST00000553605 EIF4EBP2Q13542 120 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-204ENST00000553605 AUHQ13825 339 aaKnown RBP14.04□□□□□ -0.16
PRPF39-204ENST00000553605 CRYBG3Q68DQ2 2970 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 C22orf39Q6P5X5 142 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 LINGO4Q6UY18 593 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 PARS2Q7L3T8 475 aaKnown RBP14.04□□□□□ -0.16
PRPF39-204ENST00000553605 SPRED1Q7Z699 444 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 VPS36Q86VN1 386 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 TICAM1Q8IUC6 712 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 HID1Q8IV36 788 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 CACNA2D3Q8IZS8 1091 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 TEX19Q8NA77 164 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 GPR156Q8NFN8 814 aa14.04□□□□□ -0.16
PRPF39-204ENST00000553605 APOBEC4Q8WW27 367 aaKnown RBP14.04□□□□□ -0.16
PRPF39-204ENST00000553605 TSACCQ96A04 125 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-204ENST00000553605 TOR1BO14657 336 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 STX10O60499 249 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms