RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PCDHGB5Q9Y5G0 923 aa5.34□□□□□ -1.55
SCFD1-209ENST00000553280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 A0A1W2PQ09 198 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 A0A1W2PQF6 199 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 A0A1W2PRG0 241 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 A0A1W2PRQ8 180 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 EIF3CLB5ME19 914 aaKnown RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 UBE2Q2LH0YL09 131 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 USP12O75317 370 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 DDAH2O95865 285 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 IL1AP01583 271 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 CHRM5P08912 532 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 IRF1P10914 325 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 WT1P19544 449 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 NNMTP40261 264 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 GABRB2P47870 512 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 YWHAZP63104 245 aaKnown RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 CALD1Q05682 793 aaKnown RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 IRF3Q14653 427 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 RAB41Q5JT25 222 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 SPECC1Q5M775 1068 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 TSTD2Q5T7W7 516 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 SLC30A6Q6NXT4 461 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 RBM44Q6ZP01 1051 aaKnown RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 CHST9Q7L1S5 443 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 GDPD5Q8WTR4 605 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 HDAC7Q8WUI4 952 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 TMEM170AQ8WVE7 144 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 PSPC1Q8WXF1 523 aaKnown RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 KAT2BQ92831 832 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 ZG16BQ96DA0 208 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 FCRL5Q96RD9 977 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 IFT27Q9BW83 186 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 TM2D2Q9BX73 214 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 MAK16Q9BXY0 300 aaKnown RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 SH2D4AQ9H788 454 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 SPATS2LQ9NUQ6 558 aaKnown RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 SUCLA2Q9P2R7 463 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 CFDP1Q9UEE9 299 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-209ENST00000553280 GIMAP2Q9UG22 337 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 HAO1Q9UJM8 370 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 MKLN1Q9UL63 735 aa5.33□□□□□ -1.56
SCFD1-209ENST00000553280 MST1RQ04912 1400 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 ADGRF5Q8IZF2 1346 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 TARM1B6A8C7 271 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 MSI1O43347 362 aaKnown RBP5.32□□□□□ -1.56
SCFD1-209ENST00000553280 POU1F1P28069 291 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 CHRNA5P30532 468 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 GCH1P30793 250 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 EIF2DP41214 584 aaKnown RBP5.32□□□□□ -1.56
SCFD1-209ENST00000553280 GNAQP50148 359 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 CYP2J2P51589 502 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 ARSFP54793 590 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 CDH8P55286 799 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 NANOS3P60323 173 aaKnown RBP5.32□□□□□ -1.56
SCFD1-209ENST00000553280 CEBPZQ03701 1054 aaKnown RBP5.32□□□□□ -1.56
SCFD1-209ENST00000553280 CSTF3Q12996 717 aaKnown RBP5.32□□□□□ -1.56
SCFD1-209ENST00000553280 MTA1Q13330 715 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 FRG1Q14331 258 aaKnown RBP5.32□□□□□ -1.56
SCFD1-209ENST00000553280 NAA16Q6N069 864 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-209ENST00000553280 GPAT4Q86UL3 456 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 NKAIN3Q8N8D7 197 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 CCDC191Q8NCU4 936 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 GPR150Q8NGU9 434 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 ZNF398Q8TD17 642 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 FAR1Q8WVX9 515 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 PIGKQ92643 395 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 GTF3C6Q969F1 213 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 JAKMIP2Q96AA8 810 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 CXorf56Q9H5V9 222 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 ZCCHC17Q9NP64 241 aaKnown RBP5.32□□□□□ -1.56
SCFD1-209ENST00000553280 MORF4L1Q9UBU8 362 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 ADAM21Q9UKJ8 722 aa5.32□□□□□ -1.56
SCFD1-209ENST00000553280 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-209ENST00000553280 A8MZ25 164 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 TACR3P29371 465 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 HOXA7P31268 230 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-209ENST00000553280 RNPS1Q15287 305 aaKnown RBP5.31□□□□□ -1.56
SCFD1-209ENST00000553280 HIST2H2ACQ16777 129 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-209ENST00000553280 ME3Q16798 604 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 ALDH1L2Q3SY69 923 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 KIAA1755Q5JYT7 1200 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 TBC1D9BQ66K14 1250 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 GPR139Q6DWJ6 353 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 RPUSD3Q6P087 351 aaKnown RBP5.31□□□□□ -1.56
SCFD1-209ENST00000553280 GSTA5Q7RTV2 222 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 TICAM1Q8IUC6 712 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 DNAJC10Q8IXB1 793 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 ARL14EPQ8N8R7 260 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-209ENST00000553280 PGAM5Q96HS1 289 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 BAG1Q99933 345 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-209ENST00000553280 TOR3AQ9H497 397 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 PDE7BQ9NP56 450 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 MLXIPLQ9NP71 852 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 ASAH2Q9NR71 780 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 SH3BP4Q9P0V3 963 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 MTMR6Q9Y217 621 aa5.31□□□□□ -1.56
SCFD1-209ENST00000553280 CXorf65A6NEN9 183 aa5.3□□□□□ -1.56
SCFD1-209ENST00000553280 CBY3A6NI87 242 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms