RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 FRS2Q8WU20 508 aa8.97□□□□□ -0.97
ATP2B1-207ENST00000550716 SERAC1Q96JX3 654 aa8.97□□□□□ -0.97
ATP2B1-207ENST00000550716 PRMT1Q99873 361 aaKnown RBP8.97□□□□□ -0.97
ATP2B1-207ENST00000550716 OMDQ99983 421 aa8.97□□□□□ -0.97
ATP2B1-207ENST00000550716 INTS2Q9H0H0 1204 aaKnown RBP8.97□□□□□ -0.97
ATP2B1-207ENST00000550716 ARHGAP20Q9P2F6 1191 aa8.97□□□□□ -0.97
ATP2B1-207ENST00000550716 FZD4Q9ULV1 537 aa8.97□□□□□ -0.97
ATP2B1-207ENST00000550716 SCML1Q9UN30 329 aa8.97□□□□□ -0.97
ATP2B1-207ENST00000550716 FLNBO75369 2602 aaKnown RBP8.97□□□□□ -0.97
ATP2B1-207ENST00000550716 SYNJ2BP-COX16A0A087WUM0 186 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 TARSL2A2RTX5 802 aaKnown RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 LRRC72A6NJI9 287 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 TLR4O00206 839 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 PMM2O15305 246 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 LATO43561 262 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 RNASEH1O60930 286 aaKnown RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 SDC3O75056 442 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 TNFRSF21O75509 655 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 RFPL3O75679 317 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 LDOC1O95751 146 aaPredicted RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 TRUB2O95900 331 aaKnown RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 IL1BP01584 269 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 ITGAVP06756 1048 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 SRPRAP08240 638 aaKnown RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 GOT1P17174 413 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 ABCB4P21439 1286 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 CCR5P51681 352 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 FANCCQ00597 558 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 NRG1Q02297 640 aaPredicted RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 GCNT1Q02742 428 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 TARDBPQ13148 414 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 HES3Q5TGS1 186 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 AGBL4Q5VU57 503 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 OTUD1Q5VV17 481 aaPredicted RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 FBXL19Q6PCT2 694 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 SND1Q7KZF4 910 aaKnown RBP eCLIP8.96□□□□□ -0.981e-7■■■■■ 27.7
ATP2B1-207ENST00000550716 TRIM59Q8IWR1 403 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 CCAR2Q8N163 923 aaKnown RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 ANP32BQ92688 251 aaKnown RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 FAM131CQ96AQ9 280 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 ALG14Q96F25 216 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 XPO4Q9C0E2 1151 aaKnown RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 THAP9Q9H5L6 903 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 METTL14Q9HCE5 456 aaKnown RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 GDF3Q9NR23 364 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 COX16Q9P0S2 106 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 LIMA1Q9UHB6 759 aaKnown RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 AJAP1Q9UKB5 411 aaPredicted RBP8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 CNTN6Q9UQ52 1028 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 CEP83Q9Y592 693 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 RAI2Q9Y5P3 530 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 MGAQ8IWI9 3026 aa8.96□□□□□ -0.98
ATP2B1-207ENST00000550716 FAM170AA1A519 330 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 TYW5A2RUC4 315 aaKnown RBP8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 I6L893 689 aaPredicted RBP8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 EREGO14944 169 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 GRAP2O75791 330 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 C1QL1O75973 258 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 APOEP02649 317 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 KRT5P13647 590 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 C5AR1P21730 350 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 TAS2R38P59533 333 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 SEMG2Q02383 582 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 CNTN1Q12860 1018 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 PDCLQ13371 301 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 STILQ15468 1287 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 INAVAQ3KP66 663 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 HSP90AA4PQ58FG1 418 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 RNF219Q5W0B1 726 aaPredicted RBP8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 NAPEPLDQ6IQ20 393 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 FBXL22Q6P050 247 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 C14orf80Q86SX3 495 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 TMPRSS12Q86WS5 348 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 WDTC1Q8N5D0 677 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 ZNF557Q8N988 423 aaPredicted RBP8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 BTN2A3PQ96KV6 586 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 MYOCQ99972 504 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 DDX50Q9BQ39 737 aaKnown RBP8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 TRIM5Q9C035 493 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 FAM204AQ9H8W3 233 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 ANLNQ9NQW6 1124 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 IFNKQ9P0W0 207 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 SALL4Q9UJQ4 1053 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 PCDHGA1Q9Y5H4 931 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 SNX10Q9Y5X0 201 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 PTPRQQ9UMZ3 2332 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 COL5A1P20908 1838 aaPredicted RBP8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 ZNF462Q96JM2 2506 aa8.95□□□□□ -0.98
ATP2B1-207ENST00000550716 ASH1LQ9NR48 2969 aaKnown RBP8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 TBC1D3DA0A087WVF3 549 aa8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 TBC1D3IA0A087WXS9 549 aa8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 TBC1D3EA0A087X179 549 aa8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 TBC1D3KA0A087X1G2 549 aa8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 TBC1D3FA6NER0 549 aaPredicted RBP8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 LRRC10BA6NIK2 292 aa8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 KCNU1A8MYU2 1149 aa8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 TBC1D3LB9A6J9 549 aa8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 F5H5T6 163 aa8.94□□□□□ -0.98
ATP2B1-207ENST00000550716 TRIM38O00635 465 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms