RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 PLIN3O60664 434 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 VAPBO95292 243 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 TROVE2P10155 538 aaKnown RBP eCLIP21.19■□□□□ 0.98
RITA1-201ENST00000548278 TMEM199Q8N511 208 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 ZNF398Q8TD17 642 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 E2F7Q96AV8 911 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 VPS39Q96JC1 886 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 ZNF599Q96NL3 588 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 AGO1Q9UL18 857 aaKnown RBP21.19■□□□□ 0.98
RITA1-201ENST00000548278 MUSKO15146 869 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 TEX28O15482 410 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 TGDSO95455 350 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 SGSHP51688 502 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 EPHB3P54753 998 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 CHI3L2Q15782 390 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 CNGA3Q16281 694 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 OR7D4Q8NG98 312 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 RAB3IL1Q8TBN0 382 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 PRKD2Q9BZL6 878 aa21.19■□□□□ 0.98
RITA1-201ENST00000548278 CLDN11O75508 207 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 BAIAP3O94812 1187 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 GABRB3P28472 473 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 PPM1AP35813 382 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 NUMBP49757 651 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 SERPINH1P50454 418 aaKnown RBP21.18■□□□□ 0.98
RITA1-201ENST00000548278 BST1Q10588 318 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 DBN1Q16643 649 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 ADGRF1Q5T601 910 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 ATG16L1Q676U5 607 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 KIAA0930Q6ICG6 404 aaPredicted RBP21.18■□□□□ 0.98
RITA1-201ENST00000548278 ZC3HC1Q86WB0 502 aaKnown RBP21.18■□□□□ 0.98
RITA1-201ENST00000548278 GPR65Q8IYL9 337 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 ACVR1CQ8NER5 493 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 RFWD2Q8NHY2 731 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 RANBP9Q96S59 729 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 POLR1EQ9GZS1 481 aaKnown RBP21.18■□□□□ 0.98
RITA1-201ENST00000548278 UXTQ9UBK9 157 aaPredicted RBP21.18■□□□□ 0.98
RITA1-201ENST00000548278 MAFFQ9ULX9 164 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 CHKBQ9Y259 395 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 PLXNA4Q9HCM2 1894 aa21.18■□□□□ 0.98
RITA1-201ENST00000548278 LOC285095A0A1B0GVY8 99 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 SIN3BO75182 1162 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 GJB3O75712 270 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 IRF1P10914 325 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 GMPRP36959 345 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 IRX4P78413 519 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 TMPRSS15P98073 1019 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 BNIP1Q12981 228 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 SEPT6Q14141 434 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 OTOP2Q7RTS6 562 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 C7orf26Q96N11 449 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 GPR22Q99680 433 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 SEMA3CQ99985 751 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 TRIM55Q9BYV6 548 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 RHOJQ9H4E5 214 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 CAB39LQ9H9S4 337 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 ZNF334Q9HCZ1 680 aaPredicted RBP21.17■□□□□ 0.98
RITA1-201ENST00000548278 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.17■□□□□ 0.98
RITA1-201ENST00000548278 HEATR9A2RTY3 570 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 F11P03951 625 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 PROCP04070 461 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 MPOP05164 745 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 ALDH3A1P30838 453 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 HADHAP40939 763 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 CSRP3P50461 194 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 ZNF235Q14590 738 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 ALG1LQ6GMV1 187 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 CHST9Q7L1S5 443 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 ZFRQ96KR1 1074 aaKnown RBP21.17■□□□□ 0.98
RITA1-201ENST00000548278 TMEM216Q9P0N5 145 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 DCTN4Q9UJW0 460 aa21.17■□□□□ 0.98
RITA1-201ENST00000548278 CCDC195A0A1B0GUA6 201 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 HGSO14964 777 aaPredicted RBP21.16■□□□□ 0.98
RITA1-201ENST00000548278 DNAJC8O75937 253 aaPredicted RBP21.16■□□□□ 0.98
RITA1-201ENST00000548278 AHSGP02765 367 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 ATXN1LP0C7T5 689 aaKnown RBP21.16■□□□□ 0.98
RITA1-201ENST00000548278 PAMP19021 973 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 OCRLQ01968 901 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 GRM3Q14832 879 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 DLG2Q15700 870 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 FASTKD1Q53R41 847 aaKnown RBP21.16■□□□□ 0.98
RITA1-201ENST00000548278 SIRPB2Q5JXA9 342 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 IL31Q6EBC2 164 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 NECAB2Q7Z6G3 386 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 CLEC14AQ86T13 490 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 DENND6AQ8IWF6 608 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 KCNK13Q9HB14 408 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 IL21Q9HBE4 155 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 STOML2Q9UJZ1 356 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 A0A096LPK6 155 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 E2F8A0AVK6 867 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 ILVBLA1L0T0 632 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 KDELR3O43731 214 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 SNNO75324 88 aaPredicted RBP21.16■□□□□ 0.98
RITA1-201ENST00000548278 DCTN3O75935 186 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 FGF18O76093 207 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 LINC00271P0C7V0 271 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 MBLAC2Q68D91 279 aa21.16■□□□□ 0.98
RITA1-201ENST00000548278 PLD6Q8N2A8 252 aaKnown RBP21.16■□□□□ 0.98
RITA1-201ENST00000548278 SLC22A12Q96S37 553 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms