RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 LOXL2Q9Y4K0 774 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 ICE1Q9Y2F5 2266 aa9.45□□□□□ -0.9
SSH1-205ENST00000546812 TDRD6O60522 2096 aaKnown RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 DOCK9Q9BZ29 2069 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 LRBAP50851 2863 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 A0A1W2PQM1 296 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 TCAF2A6NFQ2 919 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 RNF103O00237 685 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 FPGTO14772 594 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 FBXO21O94952 628 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 PRNPP04156 253 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 ANXA6P08133 673 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 ERCC5P28715 1186 aaPredicted RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 NOS2P35228 1153 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 POLE2P56282 527 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 CCL7P80098 99 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 TPD52L1Q16890 204 aaPredicted RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 HSP90AA4PQ58FG1 418 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 DCAF17Q5H9S7 520 aaPredicted RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 RABGAP1LQ5R372 815 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 KIAA1161Q6NSJ0 714 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 BEND5Q7L4P6 421 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 TAC4Q86UU9 113 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 CIR1Q86X95 450 aaPredicted RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 RBFAQ8N0V3 343 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 AOPEPQ8N6M6 819 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 ARL10Q8N8L6 244 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 TMEM159Q96B96 161 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 TBATAQ96M53 351 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 CCDC114Q96M63 670 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 KLF6Q99612 283 aaPredicted RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 PRMT1Q99873 361 aaKnown RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 SLC12A9Q9BXP2 914 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 TCEAL2Q9H3H9 227 aaPredicted RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 FOXJ2Q9P0K8 574 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 PLEKHB1Q9UF11 243 aaPredicted RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 APOBEC3BQ9UH17 382 aaKnown RBP9.44□□□□□ -0.9
SSH1-205ENST00000546812 RABGEF1Q9UJ41 708 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 VPS28Q9UK41 221 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 HS3ST2Q9Y278 367 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 OR51B4Q9Y5P0 310 aa9.44□□□□□ -0.9
SSH1-205ENST00000546812 DOPEY1Q5JWR5 2465 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 KCNU1A8MYU2 1149 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.43□□□□□ -0.9
SSH1-205ENST00000546812 MT-CO1P00395 513 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 RPLP0P05388 317 aaKnown RBP9.43□□□□□ -0.9
SSH1-205ENST00000546812 SRCP12931 536 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 ITIH1P19827 911 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 CD82P27701 267 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 MXI1P50539 228 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 PFN3P60673 137 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 YWHAEP62258 255 aaKnown RBP9.43□□□□□ -0.9
SSH1-205ENST00000546812 MYL5Q02045 173 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 ZFP36L1Q07352 338 aaKnown RBP9.43□□□□□ -0.9
SSH1-205ENST00000546812 SGCGQ13326 291 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 CUL2Q13617 745 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 PTK2BQ14289 1009 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 ARSIQ5FYB1 569 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 SYPL2Q5VXT5 272 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 ZSCAN30Q86W11 494 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 PHACTR4Q8IZ21 702 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 SDR16C5Q8N3Y7 309 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 ATP11CQ8NB49 1132 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 OR52K2Q8NGK3 314 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 TFAP2BQ92481 460 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 USP7Q93009 1102 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 CCDC74AQ96AQ1 378 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 PPP1R16AQ96I34 528 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 LRRC61Q9BV99 259 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 C1QTNF2Q9BXJ5 285 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 CPEB1Q9BZB8 566 aaKnown RBP9.43□□□□□ -0.9
SSH1-205ENST00000546812 SLC13A1Q9BZW2 595 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 B3GNT4Q9C0J1 378 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 CLPBQ9H078 707 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 MIS12Q9H081 205 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 NAT10Q9H0A0 1025 aaKnown RBP9.43□□□□□ -0.9
SSH1-205ENST00000546812 GULP1Q9UBP9 304 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 ARMCX3Q9UH62 379 aaPredicted RBP9.43□□□□□ -0.9
SSH1-205ENST00000546812 SLC12A6Q9UHW9 1150 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 PNMA8BQ9ULN7 279 aaPredicted RBP9.43□□□□□ -0.9
SSH1-205ENST00000546812 PLAAQ9Y263 795 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 FADS3Q9Y5Q0 445 aa9.43□□□□□ -0.9
SSH1-205ENST00000546812 RP1L1Q8IWN7 2480 aaPredicted RBP9.42□□□□□ -0.9
SSH1-205ENST00000546812 C9orf172C9J069 976 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 K7ERQ8 282 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 SART1O43290 800 aaKnown RBP9.42□□□□□ -0.9
SSH1-205ENST00000546812 AP1G1O43747 822 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 STX10O60499 249 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 FGFR1OPO95684 399 aaKnown RBP9.42□□□□□ -0.9
SSH1-205ENST00000546812 TSHRP16473 764 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 ETV5P41161 510 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 CD97P48960 835 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 NEK3P51956 506 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 EIF4EBP2Q13542 120 aaPredicted RBP9.42□□□□□ -0.9
SSH1-205ENST00000546812 CNGA2Q16280 664 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 CT47A1Q5JQC4 288 aaPredicted RBP9.42□□□□□ -0.9
SSH1-205ENST00000546812 FAXCQ5TGI0 409 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 TCERG1LQ5VWI1 586 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 FBXL22Q6P050 247 aa9.42□□□□□ -0.9
SSH1-205ENST00000546812 LVRNQ6Q4G3 990 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms