RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 AADATQ8N5Z0 425 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 TRIM58Q8NG06 486 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 GRIN3AQ8TCU5 1115 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 ALG3Q92685 438 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 FOXJ1Q92949 421 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 FAM131CQ96AQ9 280 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 HES6Q96HZ4 224 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 CPEB1Q9BZB8 566 aaKnown RBP17.06■□□□□ 0.32
CCDC38-203ENST00000546803 NEUROG2Q9H2A3 272 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 ZDHHC6Q9H6R6 413 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 HAUS2Q9NVX0 235 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 GMEB2Q9UKD1 530 aa17.06■□□□□ 0.32
CCDC38-203ENST00000546803 CKAP5Q14008 2032 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 PRR23AA6NEV1 266 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 KRIT1O00522 736 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 PPP1R12AO14974 1030 aaPredicted RBP17.05■□□□□ 0.32
CCDC38-203ENST00000546803 MATN3O15232 486 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 DDX3YO15523 660 aaKnown RBP17.05■□□□□ 0.32
CCDC38-203ENST00000546803 MAP3K6O95382 1288 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 SEMA4FO95754 770 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 RETP07949 1114 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 ACSL1P33121 698 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 DRD3P35462 400 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 MMP13P45452 471 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 DYNLT1P63172 113 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 PPIDQ08752 370 aaKnown RBP17.05■□□□□ 0.32
CCDC38-203ENST00000546803 LPAL2Q16609 132 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 BBS12Q6ZW61 710 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 CCDC13Q8IYE1 715 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 TMEFF1Q8IYR6 380 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 TEX26Q8N6G2 289 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 TSEN2Q8NCE0 465 aaKnown RBP17.05■□□□□ 0.32
CCDC38-203ENST00000546803 CCNYQ8ND76 341 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 MAML1Q92585 1016 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 ZNF419Q96HQ0 510 aaPredicted RBP17.05■□□□□ 0.32
CCDC38-203ENST00000546803 OLFM3Q96PB7 478 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 TUBGCP5Q96RT8 1024 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 GPR174Q9BXC1 333 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 HDAC8Q9BY41 377 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 OSBPL8Q9BZF1 889 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 KDM4CQ9H3R0 1056 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 SERGEFQ9UGK8 458 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 AMACRQ9UHK6 382 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 EVLQ9UI08 416 aaPredicted RBP17.05■□□□□ 0.32
CCDC38-203ENST00000546803 PCDHGA5Q9Y5G8 931 aa17.05■□□□□ 0.32
CCDC38-203ENST00000546803 LRRC72A6NJI9 287 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 PYGMP11217 842 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 ITGB7P26010 798 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 DPP6P42658 865 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 CNTN1Q12860 1018 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 LLGL1Q15334 1064 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 POM121L1PQ3SYA9 428 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 ZNF805Q5CZA5 627 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 RALGPS1Q5JS13 557 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 GDPD4Q6W3E5 623 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.04■□□□□ 0.32
CCDC38-203ENST00000546803 ASCL5Q7RTU5 278 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 SRLQ86TD4 932 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 OR6K2Q8NGY2 324 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 HCAR2Q8TDS4 363 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 RUBCNQ92622 972 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 P3H4Q92791 437 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 EXOC2Q96KP1 924 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 MGME1Q9BQP7 344 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 NCDNQ9UBB6 729 aa17.04■□□□□ 0.32
CCDC38-203ENST00000546803 TPX2Q9ULW0 747 aaKnown RBP17.04■□□□□ 0.32
CCDC38-203ENST00000546803 PACSIN2Q9UNF0 486 aaPredicted RBP17.04■□□□□ 0.32
CCDC38-203ENST00000546803 METTL12A8MUP2 240 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 TJP3O95049 919 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 EPN2O95208 641 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 CCNB1P14635 433 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 GKP32189 559 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 RGRP47804 291 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 DHPSP49366 369 aaPredicted RBP17.03■□□□□ 0.32
CCDC38-203ENST00000546803 NEK3P51956 506 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 METAP1P53582 386 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 ADPRHP54922 357 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 AP1S1P61966 158 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 RPS6KA1Q15418 735 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 SYCP2LQ5T4T6 812 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 MEI1Q5TIA1 1274 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 CCDC181Q5TID7 509 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 AGBL4Q5VU57 503 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 LYSMD4Q5XG99 296 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 NPNTQ6UXI9 565 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 ERN2Q76MJ5 926 aaKnown RBP17.03■□□□□ 0.32
CCDC38-203ENST00000546803 OR2T34Q8NGX1 318 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 OR14C36Q8NHC7 312 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 ARRDC3Q96B67 414 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 ZNF641Q96N77 438 aaPredicted RBP17.03■□□□□ 0.32
CCDC38-203ENST00000546803 LGMNQ99538 433 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 HEMGNQ9BXL5 484 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 DKK3Q9UBP4 350 aa17.03■□□□□ 0.32
CCDC38-203ENST00000546803 APOC4-APOC2K7ER74 178 aa17.02■□□□□ 0.32
CCDC38-203ENST00000546803 MUSKO15146 869 aa17.02■□□□□ 0.32
CCDC38-203ENST00000546803 INSIG1O15503 277 aa17.02■□□□□ 0.32
CCDC38-203ENST00000546803 GFRA3O60609 400 aa17.02■□□□□ 0.32
CCDC38-203ENST00000546803 NEBLO76041 1014 aa17.02■□□□□ 0.32
CCDC38-203ENST00000546803 APOC2P02655 101 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms