RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 PEX5P50542 639 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 METAP1P53582 386 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 SLC10A7Q0GE19 358 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 CNTN1Q12860 1018 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 SLC10A2Q12908 348 aaPredicted RBP17.07■□□□□ 0.32
LTBR-215ENST00000546296 PDK1Q15118 436 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 CCDC181Q5TID7 509 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 NPNTQ6UXI9 565 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 BZW1Q7L1Q6 419 aaKnown RBP17.07■□□□□ 0.32
LTBR-215ENST00000546296 TSEN2Q8NCE0 465 aaKnown RBP17.07■□□□□ 0.32
LTBR-215ENST00000546296 OR14C36Q8NHC7 312 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 FOXJ1Q92949 421 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 LRIG1Q96JA1 1093 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 LOXL4Q96JB6 756 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 SERGEFQ9UGK8 458 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 FZD4Q9ULV1 537 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 WASF2Q9Y6W5 498 aa17.07■□□□□ 0.32
LTBR-215ENST00000546296 hCG_1818297A0A087WSY0 165 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 LRRC72A6NJI9 287 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 MATN3O15232 486 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 GFRA3O60609 400 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 RETP07949 1114 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 CCNCP24863 283 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 MMP13P45452 471 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 NR2C2P49116 596 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 CREB5Q02930 508 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 PPP2R5EQ16537 467 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 SYCP2LQ5T4T6 812 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 LYSMD4Q5XG99 296 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 GDPD4Q6W3E5 623 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 SRLQ86TD4 932 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 LRRN4Q8WUT4 740 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 RUBCNQ92622 972 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 ALG3Q92685 438 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 ARRDC3Q96B67 414 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 TSGA13Q96PP4 275 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 OSBPL1AQ9BXW6 950 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 KCNF1Q9H3M0 494 aa17.06■□□□□ 0.32
LTBR-215ENST00000546296 WDR87Q6ZQQ6 2873 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3DA0A087WVF3 549 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3IA0A087WXS9 549 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3EA0A087X179 549 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3KA0A087X1G2 549 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3FA6NER0 549 aaPredicted RBP17.05■□□□□ 0.32
LTBR-215ENST00000546296 MEI4A8MW99 385 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3LB9A6J9 549 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 PPP1R12AO14974 1030 aaPredicted RBP17.05■□□□□ 0.32
LTBR-215ENST00000546296 INSIG1O15503 277 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 SLC7A4O43246 635 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 ZSCAN12O43309 604 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 PEX11BO96011 259 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 UGT2B4P06133 528 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3HP0C7X1 549 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 PYGMP11217 842 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TGM2P21980 687 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 DRD3P35462 400 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 HSPA9P38646 679 aaKnown RBP17.05■□□□□ 0.32
LTBR-215ENST00000546296 PTGER3P43115 390 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 SCNN1BP51168 640 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 ZNF33AQ06730 810 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 ITKQ08881 620 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 NSUN2Q08J23 767 aaKnown RBP eCLIP17.05■□□□□ 0.32
LTBR-215ENST00000546296 CCDC173Q0VFZ6 552 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 AP1B1Q10567 949 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 HNRNPDQ14103 355 aaKnown RBP17.05■□□□□ 0.32
LTBR-215ENST00000546296 ZNF805Q5CZA5 627 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3GQ6DHY5 549 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3CQ6IPX1 549 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 FBXL19Q6PCT2 694 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 ERN2Q76MJ5 926 aaKnown RBP17.05■□□□□ 0.32
LTBR-215ENST00000546296 CYP2U1Q7Z449 544 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 CCDC13Q8IYE1 715 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 TBC1D3Q8IZP1 549 aaPredicted RBP17.05■□□□□ 0.32
LTBR-215ENST00000546296 PAF1Q8N7H5 531 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 CADM4Q8NFZ8 388 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 UBE2Q2Q8WVN8 375 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 PIGKQ92643 395 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 P3H4Q92791 437 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 HDAC11Q96DB2 347 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 ZNF419Q96HQ0 510 aaPredicted RBP17.05■□□□□ 0.32
LTBR-215ENST00000546296 HSPA12BQ96MM6 686 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 KLHL32Q96NJ5 620 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 PSKH2Q96QS6 385 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 LGMNQ99538 433 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 HDAC8Q9BY41 377 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 OSBPL8Q9BZF1 889 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 ARRDC1-AS1Q9H2J1 176 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 HAUS2Q9NVX0 235 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 SAE1Q9UBE0 346 aaPredicted RBP17.05■□□□□ 0.32
LTBR-215ENST00000546296 VPS13AQ96RL7 3174 aa17.05■□□□□ 0.32
LTBR-215ENST00000546296 RNF103O00237 685 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 DDX3YO15523 660 aaKnown RBP17.04■□□□□ 0.32
LTBR-215ENST00000546296 FSBPO95073 299 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 EPN2O95208 641 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 CCNB1P14635 433 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 ITGB7P26010 798 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 RGRP47804 291 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 CSNK1DP48730 415 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 ADCY2Q08462 1091 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 ZNF211Q13398 564 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms