RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 FOSL1P15407 271 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CTRB1P17538 263 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CCNA2P20248 432 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ELK3P41970 407 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 PKNOX1P55347 436 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ZNF280AP59817 542 aaPredicted RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 STX1BP61266 288 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CNTN2Q02246 1040 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CBLBQ13191 982 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 BFSP2Q13515 415 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 RAB39AQ14964 217 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 DLG2Q15700 870 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CTRB2Q6GPI1 263 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 SDE2Q6IQ49 451 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ZCCHC8Q6NZY4 707 aaKnown RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 PIWIL3Q7Z3Z3 882 aaKnown RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 GLRX5Q86SX6 157 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 SLC22A16Q86VW1 577 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CHSY1Q86X52 802 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CADM2Q8N3J6 435 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 BEND7Q8N7W2 519 aaPredicted RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 ZC3H15Q8WU90 426 aaKnown RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 C12orf42Q96LP6 360 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 IL12RB2Q99665 862 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 OSBPL11Q9BXB4 747 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 SDCBP2Q9H190 292 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 LHX5Q9H2C1 402 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 SEPT3Q9UH03 358 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 STRIP2Q9ULQ0 834 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ZBTB42B2RXF5 422 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CYB561D2O14569 222 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 AIM2O14862 343 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 NUAK1O60285 661 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 MAN1A2O60476 641 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 AVILO75366 819 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 MAFO75444 373 aaPredicted RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 ENDOD1O94919 500 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 KLHL2O95198 593 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 NADKO95544 446 aaPredicted RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 KRT8P05787 483 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 SERPINA6P08185 405 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ALOX5P09917 674 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 GFAPP14136 432 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 TSHRP16473 764 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ATF4P18848 351 aaPredicted RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 ITGAXP20702 1163 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 UBA1P22314 1058 aaKnown RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 PROZP22891 400 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 VASPP50552 380 aaPredicted RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 SLC13A2Q13183 592 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ORC1Q13415 861 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 LRIT3Q3SXY7 679 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 FAM91A1Q658Y4 838 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 TRNP1Q6NT89 227 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 UGT3A1Q6NUS8 523 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 NPNTQ6UXI9 565 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CDHR3Q6ZTQ4 885 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 FRMD7Q6ZUT3 714 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 CRLF3Q8IUI8 442 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 SLC44A1Q8WWI5 657 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 RSAD2Q8WXG1 361 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ALKBH8Q96BT7 664 aaKnown RBP7.98□□□□□ -1.13
UBR1-202ENST00000546274 APOPT1Q96IL0 206 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 TWNKQ96RR1 684 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 AIFM2Q9BRQ8 373 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 UQCC2Q9BRT2 126 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 TEX13BQ9BXU2 312 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 C8orf4Q9NR00 106 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 COMMD8Q9NX08 183 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ATPIF1Q9UII2 106 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 RIMS3Q9UJD0 308 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 ZNF112Q9UJU3 913 aa7.98□□□□□ -1.13
UBR1-202ENST00000546274 KBTBD13C9JR72 458 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 PEX10O60683 326 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 SNX2O60749 519 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 SPAG6O75602 509 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 FAM155BO75949 473 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 CLPXO76031 633 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 SEMA3DO95025 777 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 IL1BP01584 269 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 IL32P24001 234 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 RPS12P25398 132 aaKnown RBP7.97□□□□□ -1.13
UBR1-202ENST00000546274 MIPP30301 263 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 ARPP19P56211 112 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 YWHAEP62258 255 aaKnown RBP7.97□□□□□ -1.13
UBR1-202ENST00000546274 IFITM3Q01628 133 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 OCA2Q04671 838 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 FAAP100Q0VG06 881 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 MMRN1Q13201 1228 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 DUOXA2Q1HG44 320 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 TRIM71Q2Q1W2 868 aaKnown RBP7.97□□□□□ -1.13
UBR1-202ENST00000546274 ZNF699Q32M78 642 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 IGSF11Q5DX21 431 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 SH3PXD2AQ5TCZ1 1133 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 CATSPERGQ6ZRH7 1159 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 PALM2Q8IXS6 379 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 LSMEM2Q8N112 164 aa7.97□□□□□ -1.13
UBR1-202ENST00000546274 BHLHE22Q8NFJ8 381 aaPredicted RBP7.97□□□□□ -1.13
UBR1-202ENST00000546274 USP13Q92995 863 aaPredicted RBP7.97□□□□□ -1.13
UBR1-202ENST00000546274 RMDN1Q96DB5 314 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms